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Transcriptome analysis of rice in relation to infection with rice tungro spherical virus (RTSV)

ABSTRACT: Near-isogenic lines TW16-4 and TW16-69 were developed from the cross between TN1 (recurrent parent susceptible to RTSV) and Utri Merah (donor parent resistant to RTSV). TW16-4 is susceptible to RTSV, whereas TW16-69 is resistant to RTSV based on a serolog. Keywords: time course, virus infection, disease response

ORGANISM(S): Oryza sativa Japonica Group Oryza sativa Indica Group

PROVIDER: GSE14606 | GEO | 2009/08/31

SECONDARY ACCESSION(S): PRJNA111727

REPOSITORIES: GEO

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Transcription profiling of rice in relation to infection with rice tungro spherical virus (RTSV)

Project description:Near-isogenic lines TW16-4 and TW16-69 were developed from the cross between TN1 (recurrent parent susceptible to RTSV) and Utri Merah (donor parent resistant to RTSV). TW16-4 is susceptible to RTSV, whereas TW16-69 is resistant to RTSV based on a serolog. Experiment Overall Design: Comparison between RTSV and mock-infected rice. Biological replicates: 2 control (mock), 2 RTSV-infected, independently grown and harvested at 7 days after inoculation (DAI). Each sample was prepared using leaf tissues pooled from 5 plants grown under the same conditions.

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