Transcriptomics

Dataset Information

38

Transcriptome analysis of rice in relation to infection with rice tungro spherical virus (RTSV)


ABSTRACT: Near-isogenic lines TW16-4 and TW16-69 were developed from the cross between TN1 (recurrent parent susceptible to RTSV) and Utri Merah (donor parent resistant to RTSV). TW16-4 is susceptible to RTSV, whereas TW16-69 is resistant to RTSV based on a serolog. Keywords: time course, virus infection, disease response Overall design: Comparison between RTSV and mock-infected rice. Biological replicates: 2 control (mock), 2 RTSV-infected, independently grown and harvested at 7 days after inoculation (DAI). Each sample was prepared using leaf tissues pooled from 5 plants grown under the same conditions.

INSTRUMENT(S): Agilent-012106 Rice Oligo Microarray G4138A (Feature Number version)

ORGANISM(S): Oryza sativa Indica Group  

SUBMITTER: IL-RYONG CHOI  

PROVIDER: GSE14606 | GEO | 2009-08-31

SECONDARY ACCESSION(S): PRJNA111727

REPOSITORIES: GEO

Similar Datasets

2009-09-04 | E-GEOD-14606 | ArrayExpress
2009-12-07 | GSE16140 | GEO
2010-05-18 | E-GEOD-16140 | ArrayExpress
2009-12-07 | GSE16141 | GEO
2007-10-25 | GSE6124 | GEO
2008-06-14 | E-GEOD-6124 | ArrayExpress
2010-05-18 | E-GEOD-16141 | ArrayExpress
2012-12-31 | E-GEOD-38150 | ArrayExpress
2008-06-14 | E-GEOD-6125 | ArrayExpress
2011-12-31 | GSE29967 | GEO