Genomics

Dataset Information

0

Limited transcriptional responses of Rickettsia rickettsii exposed to environmental stimuli


ABSTRACT: Rickettsiae are strict obligate intracellular pathogens that alternate between arthropod and mammalian hosts in a zoonotic cycle. Typically, pathogenic bacteria that cycle between environmental sources and mammalian hosts adapt to the respective environments by coordinately regulating gene expression such that genes essential for survival and virulence are expressed only upon infection of mammals. Temperature is a common environmental signal for upregulation of virulence gene expression although other factors may also play a role. We examined the transcriptional responses of Rickettsia rickettsii, the agent of Rocky Mountain spotted fever, to a variety of environmental signals expected to be encountered during its life cycle. R. rickettsii exposed to differences in growth temperature (25o C vs. 37o C), iron limitation, and host cell species displayed nominal changes in gene expression under any of these conditions with only 0, 5, or 7 genes, respectively, changing more than 3-fold in expression levels. R. rickettsii is not totally devoid of ability to respond to temperature shifts as cold shock (37o C vs. 4o C) induced a change greater than 3-fold in up to 57 genes. Rickettsiae continuously occupy a relatively stable environment which is the cytosol of eukaryotic cells. Because of their obligate intracellular character, rickettsiae are believed to be undergoing reductive evolution to a minimal genome. We propose that their relatively constant environmental niche has led to a minimal requirement for R. rickettsii to respond to environmental changes with a consequent deletion of non-essential transcriptional response regulators. A minimal number of transcriptional regulators in the R. rickettsii genome is consistent with this hypothesis.

ORGANISM(S): Rickettsia rickettsii Staphylococcus epidermidis RP62A Chlamydia pneumoniae AR39 Coxiella burnetii RSA 493 Granulibacter bethesdensis Staphylococcus epidermidis ATCC 12228 Coxiella burnetii Chlamydia muridarum Chlamydia trachomatis D/UW-3/CX Staphylococcus haemolyticus JCSC1435 Borreliella burgdorferi B31 Staphylococcus aureus subsp. aureus MW2 Chlamydia caviae GPIC

PROVIDER: GSE14965 | GEO | 2009/05/23

SECONDARY ACCESSION(S): PRJNA111843

REPOSITORIES: GEO

Similar Datasets

2010-06-25 | E-GEOD-14965 | biostudies-arrayexpress
2022-07-26 | PXD025848 | Pride
2008-08-08 | GSE12377 | GEO
2019-11-25 | GSE134017 | GEO
2023-07-06 | GSE226832 | GEO
| PRJNA189712 | ENA
| PRJNA37013 | ENA
2010-05-26 | E-GEOD-8041 | biostudies-arrayexpress
2008-06-04 | GSE8041 | GEO
2009-03-03 | GSE14998 | GEO