Transcriptional profiling by RNA-seq in shG9a Rh41 rhabdomyosarcoma cells

ABSTRACT: Alveolar Rhabdomyosarcoma (ARMS) is the most aggressive subtype mainly caused by the expression of PAX3/7-FOXO1 oncoproteins Here, we show that G9a interacts with PAX3-FOXO1 and regulates its activity. In line with this, transcriptomic analysis by RNA-seq revealed that G9a depletion in RH41 cells induced transcriptional changes inversely correlated by those imposed by PAX3-FOXO1 expression. Overall, our results indicate that G9a promotes PAX3-FOXO1 stability, thus sustaining ARMS myoblastic state.

ORGANISM(S): Homo sapiens

PROVIDER: GSE152359 | GEO | 2022/08/22

REPOSITORIES: GEO