Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

MRNA profiles in Y-organ of normal and eyestalk-ablated Eriocheir Sinensis

ABSTRACT: We sequenced the mRNA in the Y-organ of normal and eyestalk-ablated Eriocheir Sinensis and obtained the transcriptome profiling (RNA-seq) of the two samples with Next-generation sequencing (NGS) technique. The unigene expression of the two samples were compared and the differetially expressed unigenes were listed.

ORGANISM(S): Eriocheir sinensis

PROVIDER: GSE153552 | GEO | 2020/07/01

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Transcriptome profiling of five mixed tissues for juvenile Eriocheir sinensis

Project description:The transcriptome profiling five tissues of juvenile Eriocheir sinensis, including gill, muscle, thoracic ganglion, eyestalk and hepatopancreas, were sequenced to get the basic dataset for constructed a genome-scale metabolic network model for E. sinensis. The model was used to predict the optimal nutrient requirements of E. sinensis in feed and suggestions for feed improvement were put forward based on the simulation results.

2022-06-30 | GSE182818 | GEO

mRNA profiles in Y-organ of normal and eyestalk-ablated Eriocheir Sinensis

Project description:mRNA profiles in Y-organ of normal and eyestalk-ablated Eriocheir Sinensis

| PRJNA643225 | ENA

RNA-seq analysis of Eriocheir sinensis muscle

Project description:the chromatin accessibility and gene expression of muscle in E. sinensis in pre-molt (D) and post-molt (A) stages were sequenced by Assay of Transposase Accessible Chromatin sequencing (ATAC-seq) and RNA-seq, respectively.The differntial peaks in ATAC-seq and differntial genes in RNA-seq were analzed. The data was used to analysis the differentially expressed genes (DEGs) in muscle before and after molting by combining ATAC-seq and RNA-seq

2022-07-17 | GSE206232 | GEO

ATAC-seq analysis of Eriocheir sinensis muscle

2022-07-17 | GSE206231 | GEO

Transcriptome analysis of the litchi fruit borer (Conopomorpha sinensis)

Project description:Purpose: transcriptome sequencing of Conopomorpha sinensis Methods: high-through Illumina HiSeqTM 2000 Results:66017 transcripts,35383 unigenes Conclusions:This study provided valuable transcriptome data for the litchi fruit borer, which was the first fundamental genomic basis for exploiting gene resources from the litchi fruit borer

2018-03-03 | GSE67194 | GEO

Transcriptome of Chinese sturgeon (Acipenser sinensis) from the hypothalamic-pituitary-gonad axis in two sex development stages

Project description:Here, the HPG axis transcriptomes of A. sinensis were sequenced using Illumina HiSeq 2000 and 4000 platforms. A total of 271.19 Gb filtered data from 45 samples belonging to 15 individuals (six individuals in stage I, six males and three females in stage II) were obtained, and 74.50% of 121,952 assembled unigenes were annotated to the non-redundant (NR), Swiss-Prot, Kyoto Encyclopedia of Genes and Genomes (KEGG), Cluster of Orthologous Groups of proteins (COG), InterPro, Gene Ontology (GO) and NT databases. Additionally, 78,770 unigenes contained complete open reading frames (ORFs). A total of 51,570 simple sequence repeats (SSRs) were detected, and the number of differentially expressed genes (DEGs) from 1,531 to 34,439 in 18 pairwise comparisons were identified for HPG samples of male and female A. sinensis in two stages. We reported the first integrated transcriptome data from HPG samples of male and female A. sinensis in stage I and II of gonadal development. These data offer valuable resources for research into reproductive regulation and the HPG axis interaction in A. sinensis and other sturgeons.

2019-05-15 | GSE126616 | GEO

Eriocheir sinensis breed:Eriocheir sinensis

Project description:Eriocheir sinensis breed:Eriocheir sinensis Raw sequence reads

| PRJNA553013 | ENA

Large-scale analysis of the androgenic gland proteome in the Chinese mitten crab Eriocheir sinensis

Project description:Large-scale analysis of the androgenic gland proteome in the Chinese mitten crab Eriocheir sinensis

2021-09-10 | PXD024496 | Pride

Proteomic analysis of accessory gland in sexually mature Eriocheir sinensis

Project description:The accessory gland (AG), an important component of the male reproductive system, enhances the fertility of spermatozoa during male reproduction. Some AG proteins are known to bind to the spermatozoa membrane and affect its function and properties. In this study, we describe, for the first time, a comprehensive catalog of proteins of the AG secreted fluid during the mature phase of the Chinese mitten crab (Eriocheir sinensis). AG secreted proteins were separated by one-dimensional gel electrophoresis and analyzed by reverse phase high-performance liquid chromatography coupled with tandem mass spectrometry (HPLC-MS/MS).

2015-08-07 | PXD000700 | Pride

Eriocheir sinensis

Project description:Eriocheir sinensis Assembly

| PRJNA394984 | ENA