Transcriptomics

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Conserved interferon-gamma signaling and decreased immune exclusion programs in responses to immune checkpoint blockade therapy


ABSTRACT: Purpose: We treated melanoma cell lines with IFNG to assess which ones would be resistant or responsive to T-cell attack. Methods: We treated the melanoma cell lines with IFNG and then sequenced them at 6 hours to assess changes the transcriptome. Results: Unless the cell lines had JAK1 or JAK2 KO, they responded very consistently with human melanocytes (normals), revealing a consistent signature for IFNG response in melanoma. Conclusions: IFNG signaling is conserved in melanoma cell lines, and there are genes that go down in IFNG that allow immune infiltration to make immune blockade response possible.

ORGANISM(S): Homo sapiens

PROVIDER: GSE154996 | GEO | 2020/07/24

REPOSITORIES: GEO

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