Genomics

Dataset Information

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A simple optimization can improve the performance of single feature polymorphism detection by Affymetrix expression array: Transcript and Genome Hybridizations


ABSTRACT: The publicly available genome sequence information of two rice strains, japonica cultivar Nipponbare and indica cultivar 93-11, opens a great opportunity for investigation of performances DNA genotyping by high-density oligonucleotide arrays. Here, we compare single feature polymorphism (SFP) detection performances between whole genome hybridization and transcript hybridization using Affymetrix Rice Expression Array and the two rice cultivars.

ORGANISM(S): Oryza sativa Oryza sativa Japonica Group Oryza sativa Indica Group

PROVIDER: GSE16341 | GEO | 2010/06/01

SECONDARY ACCESSION(S): PRJNA115273

REPOSITORIES: GEO

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