Transcriptomics

Dataset Information

20

Gene expression profiles of cap mesenchyme and renal vesicle isolated between P0-P4 from Crym-EGFP neonatal transgenic mice using FACS. (GUDMAP Series ID: 28)


ABSTRACT: The long term objective is to create an encyclopedia of the expression levels of all genes in multiple components of the developing kidney. The central thesis is straightforward. The combination of fluorescent activated cell sorting (FACS) plus microarray analysis offers a powerful, efficient and effective method for the creation of a global gene expression atlas of the developing kidney. Microarrays with essentially complete genome coverage can be used to quantitate expression levels of every gene in FACS isolated components of the developing kidney. The ensuing rapid read-out provides an expression atlas that is more sensitive, more economical and more complete than would be possible by in situ hybridizations alone. Overall design: At E18.5, pups were isolated from CRYM-BAC transgenic mice and fostered to CD-1 mice. Cap mesenchyme cells were isolated from the kidney by fluorescent activated cell sorting (FACS) on postnatal days 0, 1, 2, 3, and 4. RNA was isolated from FACS sorted cells and the gene expression profiles were determined by microarrays.

INSTRUMENT(S): [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]

ORGANISM(S): Mus musculus  

SUBMITTER: GUDMAP Developers   

PROVIDER: GSE17139 | GEO | 2010-07-16

SECONDARY ACCESSION(S): PRJNA123459

REPOSITORIES: GEO

altmetric image

Publications

Sorry, this publication's infomation has not been loaded in the Indexer, please go directly to PUBMED or Altmetric.

Similar Datasets

2014-05-02 | E-GEOD-17139 | ArrayExpress
2009-04-25 | GSE15797 | GEO
2011-06-10 | E-GEOD-12309 | ArrayExpress
2011-06-10 | E-GEOD-17138 | ArrayExpress
2010-07-16 | GSE17138 | GEO
2011-06-10 | E-GEOD-11232 | ArrayExpress
2011-06-10 | E-GEOD-8232 | ArrayExpress
2007-06-25 | GSE8232 | GEO
2008-08-04 | GSE12309 | GEO
2008-06-18 | GSE11232 | GEO