Transcriptomics

Dataset Information

51

Transcriptional profiling of 77 tissue samples from germ-free and conventionally raised mice.


ABSTRACT: Whole-transcriptome survey of gene expression differences between germ-free (GF) and conventionally raised (CONV-R) mice. To assess the role of toll-like receptor signalling, both wild-type and Myd88 -/- mice were used. Overall design: Four different tissues were harvested from 20 mice (5 WT CONV-R, 5 Myd88 -/- CONV-R, 4 WT GF, 6 Myd88 -/- GF) and expression profiles were determines using the Affymetrix Mouse Gene 1.0ST platform. 77 samples remained after quality control.

INSTRUMENT(S): [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]

ORGANISM(S): Mus musculus  

SUBMITTER: Erik Larsson  

PROVIDER: GSE17438 | GEO | 2011-12-08

SECONDARY ACCESSION(S): PRJNA118879

REPOSITORIES: GEO

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