Transcriptomics,Genomics

Dataset Information

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RNAseq analysis of blood from patients with Multisystem Inflammatory Syndrome in Children (MISC)


ABSTRACT: RNAseq analysis of RNA extracted from blood of febrile controls and MISC patients Overall design: RNA was extracted from blood of 13 febrile controls and 12 MISC patients. Library construction was performed using the SMARTer Stranded Total RNA-Seq Kit v3. Sequencing was performed on the NovaSeq 6000 (Illumina) using 2x50 bp sequencing.

INSTRUMENT(S): Illumina NovaSeq 6000 (Homo sapiens)

ORGANISM(S): Homo Sapiens

SUBMITTER: Rebecca Amelia Porritt 

PROVIDER: GSE179992 | GEO | 2021-10-21

REPOSITORIES: GEO

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Publications

The autoimmune signature of hyperinflammatory multisystem inflammatory syndrome in children.

Porritt Rebecca A RA   Binek Aleksandra A   Paschold Lisa L   Rivas Magali Noval MN   McArdle Angela A   Yonker Lael M LM   Alter Galit G   Chandnani Harsha K HK   Lopez Merrick M   Fasano Alessio A   Van Eyk Jennifer E JE   Binder Mascha M   Arditi Moshe M  

The Journal of clinical investigation 20211001 20


Multisystem inflammatory syndrome in children (MIS-C) manifests as a severe and uncontrolled inflammatory response with multiorgan involvement, occurring weeks after SARS-CoV-2 infection. Here, we utilized proteomics, RNA sequencing, autoantibody arrays, and B cell receptor (BCR) repertoire analysis to characterize MIS-C immunopathogenesis and identify factors contributing to severe manifestations and intensive care unit admission. Inflammation markers, humoral immune responses, neutrophil activ  ...[more]

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