Transcriptomics

Dataset Information

0

Effects of ethyl carbamate exposure on C. elegans transcriptome


ABSTRACT: Ethyl carbamate is a common food contaminant prevalent in fermented food with probable carcinogenic effects in animals. To date, other toxicological properties of ethyl carbamate are not well characterized. Using the genetic model Caenorhabditis elegans, we found that chronic exposure to ethyl carbamate during larval development inhibits growth while exposure at adulthood inhibits reproduction, shortens lifespan, and promotes degeneration of dopaminergic neurons. Through whole-transcriptome RNA-sequencing, we found that ethyl carbamate invokes a widespread transcriptomic response inducing the differential expression of > 4,000 genes by at least 2-fold. Functional analysis of RNA-sequencing data revealed that genes up-regulated enrich to various neuron regulatory processes and xenobiotic defense. Gene expression analysis confirms that various genes functioning within phase 1 and 2 detoxification responses along with ABC transporters are highly up-regulated in response to ethyl carbamate exposure, suggesting the induction of oxidative stress. Overall, these findings demonstrates new toxicological properties of chronic ethyl carbamate exposure and provide new insights into the effects in has on transcriptome regulation in the C. elegans model.

ORGANISM(S): Caenorhabditis elegans

PROVIDER: GSE190099 | GEO | 2022/04/13

REPOSITORIES: GEO

Similar Datasets

| PRJNA785862 | ENA
2012-10-01 | E-GEOD-38997 | biostudies-arrayexpress
2022-02-06 | GSE196102 | GEO
2019-04-18 | GSE121419 | GEO
2023-07-19 | GSE160175 | GEO
2023-07-19 | GSE160155 | GEO
| PRJNA598711 | ENA
2012-03-06 | E-GEOD-36307 | biostudies-arrayexpress
2023-07-19 | GSE160117 | GEO
2023-07-19 | GSE158903 | GEO