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Mutant comparison - characterisation of wat1 mutant

ABSTRACT: rs08-04_wat1-ralstonia - mutant comparison - identification of the role of the plant cell wall in the interactions between plants and pathogenic agents - wt versus mutant comparison in the leaf and the root Keywords: wt vs mutant comparison

ORGANISM(S): Arabidopsis thaliana

PROVIDER: GSE19077 | GEO | 2010/07/01

SECONDARY ACCESSION(S): PRJNA120483

REPOSITORIES: GEO

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mutant comparison - characterisation of wat1 mutant

Project description:rs08-04_wat1-ralstonia - mutant comparison - identification of the role of the plant cell wall in the interactions between plants and pathogenic agents - wt versus mutant comparison in the leaf and the root Keywords: wt vs mutant comparison 6 dye-swap - CATMA arrays

2010-07-01 | E-GEOD-19077 | biostudies-arrayexpress

ralstonia infection-characterisation of wat1 mutant

Project description:rs08-04_wat1-ralstonia - ralstonia infection - identification of the role of the plant cell wall in the interactions between plants and pathogenic agents - Comparison between the mutant and the wt at different time after infection with ralstonia bacteria Keywords: treated vs untreated comparison

2010-08-01 | GSE19081 | GEO

ralstonia infection-characterisation of wat1 mutant

2010-07-31 | E-GEOD-19081 | biostudies-arrayexpress

Studies of two mutants for clavata genes (clavata-ralstonia)

Project description:ra08-02_clavata-ralstonia - clavata-ralstonia - Clavata1 (Clv1.12) and clavata2 (RPL10) mutants display an increased resistance to the bacteria Ralstonia solanacearum. Transcriptome analysis aims to understand resistance mechanisms. - 3 biological repets Keywords: wt vs mutant comparison

2009-10-30 | GSE18757 | GEO

Adaptation of Root Architecture to Abiotic Stress

Project description:rs08-01_met2 - comparative analysis of catma chips with a met2 overexpression line - Role of the MET2 methyltransferase on methylation and gene expression in arabidopsis - Comparison of transcription in roots and aerial parts of one week-old plants from two lines (WT and MET2 overexpressor) Keywords: organ comparison,wt vs mutant comparison

2009-05-28 | GSE11563 | GEO

bac2 mutant transcriptome modification during osmotic stress

Project description:rs08-05_bac2 - bac2-catma - We are studying the function of a gene encoding a mitochondrial basic amino acid carrier , BAC2 in Arabdopsis thaliana.This gene is expressed during osmotic and salt stresses, and dark-induced senescence. We wish to determine whether there are transcriptome modifications during osmotic stress in mutant plants (bac2) compared to wild-type plants . - Mutant and Wild-type plants were grown on grids for 7 days on plates containing MS/2 and saccharose. Plants were transferred for 24h to liquid medium containing MS/2 saccharose (untreated plants) or 0.4M mannitol MS/2 saccharose (treated plants). Keywords: gene knock out,treated vs untreated comparison,wt vs mutant comparison

2009-10-01 | GSE15063 | GEO

bac2 mutant transcriptome modification during osmotic stress

2009-10-01 | E-GEOD-15063 | biostudies-arrayexpress

Studies of two mutants for clavata genes (clavata-ralstonia)

2009-10-30 | E-GEOD-18757 | biostudies-arrayexpress

leaf transcriptome comparison between wt and urt1 (salk_087647) -Transcriptome comparison between WT and a mutant impaired in RNA uridylation.

Project description:rs11-10_urt1 - leaf transcriptome comparison between wt and urt1 (salk_087647) - Identification of mRNA targets of the terminal uridylyltransferase URT1 (AT2G45620) in Arabidopsis thaliana. - Identification of the RNA targets of the terminal uridylyl transferase URT1 (AT2G45620). Mature rosettte leaf transcriptomes were compared between WT and a urt1 knock-out mutant (SALK_087647).

2012-07-13 | GSE38902 | GEO

The luh-4 mutant has a differential transcriptional program in response to Al stress

Project description:To investigate how LUH regulates Al binding to cell-wall and thus inhibition of root growth under Al stress, a transcriptional analysis through RNAseq was performed by comparing the luh-4 mutant and WT plants in the presence or absence of Al. In WT plants, 316 and 336 genes, respectively, were up- and down-regulated at least 2-fold, while in luh-4, 239 and 305 genes, respectively, were up- and down-regulated at least 2-fold by Al stress. By comparison with WT seedlings, we found that 103 and 38 genes, respectively, were up- and down-regulated at least 2-fold in the non-stressed luh-4 mutant, while 77 and 33 genes, respectively, were up- and down-regulated at least 2-fold in Al-subjected luh-4 roots.

2019-08-08 | GSE85292 | GEO

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