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Transcriptomics analysis of NOP16-regulated genes in MDA-MB231 cells [RNA-seq]

ABSTRACT: The goal of RNA-seq is to identify the global transcriptional alteration by NOP16 overexpression or deletion in triple negative breast cancer cell line MDA-MB231 cells. Three (or Two) biological replicates were assigned for each group and in total 6 groups were prepared for these RNA seq libraries. We mapped about 20 million reads per sample to hg38 human reference genome, and counted and normalized each reads number and identified the differentially expressed genes.

ORGANISM(S): Homo sapiens

PROVIDER: GSE192495 | GEO | 2023/12/31

REPOSITORIES: GEO

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CUT&RUN analysis for NOP16-mediated H3K27me3 alteration in MDA-MB231 cells [CUT&RUN-seq]

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