Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

A Bacillus anthracis RNA binding protein post-transcriptionally regulates two component signaling through RNA turnover [RIP-Seq]

ABSTRACT: Formaldehyde cross-linking RNA immunoprecipitation coupled with illumina sequencing (fRIP-seq) was performed to pinpoint the direct RNA targets of KrrA using a FLAG-tagged KrrA construct that is driven by a constitutive promoter Plgt (pOS1.PlgtkrrA-FLAG).

ORGANISM(S): Bacillus anthracis

PROVIDER: GSE193211 | GEO | 2022/01/10

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

A Bacillus anthracis RNA binding protein post-transcriptionally regulates two component signaling through RNA turnover

Project description:This SuperSeries is composed of the SubSeries listed below.

2022-01-10 | GSE193212 | GEO

A Bacillus anthracis RNA binding protein post-transcriptionally regulates two component signaling through RNA turnover [RNA-Seq]

Project description:To uncover the effects of KrrA regulation on gene transcription and define the bacterial response imposed by this regulation, a transcriptomic study was carried out in which Bacillus anthracis krrA was compared to WT in two growth conditions: LB in the presence or absence of ‘205.

2022-01-10 | GSE193210 | GEO

Activity of the Bacillus anthracis 20 kDa protective antigen component

Project description:Edema factor of anthrax binds to the protective antigen (PA83) which cleaves to PA63 and PA20. The role of PA20 was examined using highthroughput gene expression analysis of human peripheral blood mononuclear cells (PBMC) exposed to PA20. Keywords: Toxicity determination

2008-08-26 | GSE12533 | GEO

A Bacillus anthracis RNA binding protein post-transcriptionally regulates two component signaling through RNA turnover [RIP-Seq]

Project description:A Bacillus anthracis RNA binding protein post-transcriptionally regulates two component signaling through RNA turnover [RIP-Seq]

| PRJNA795438 | ENA

Activity of the Bacillus anthracis 20 kDa protective antigen component.

Project description: Not available

| S-EPMC2564935 | biostudies-literature

Activity of the Bacillus anthracis 20 kDa protective antigen component

2008-08-26 | E-GEOD-12533 | biostudies-arrayexpress

Identification of Bacillus anthracis spore component antigens conserved across diverse Bacillus cereus sensu lato strains.

Project description: Not available

| S-EPMC2690476 | biostudies-literature

A Bacillus anthracis RNA binding protein post-transcriptionally regulates two component signaling through RNA turnover

Project description:A Bacillus anthracis RNA binding protein post-transcriptionally regulates two component signaling through RNA turnover

| PRJNA795436 | ENA

HDAC mediated suppression of histone turnover promotes epigenetic stability of heterochromatin

Project description:Analysis of histone H3 turnover in wild-type and mutant fission yeast cells by using MNase-ChIP-chip Exponentially growing cultures of fission yeast cells expressing an ectopic copy of FLAG tagged histone H3 under the control of inv1 promoter were synchronized and expression of H3-FLAG was induced by changing the carbon source of the medium to Sucrose. Cells were crosslinked with 1% Formaldehyde and chromatin was fragmented into mononucleosomes by using micrococcal nuclease (MNase). Chromatin immunoprecipitated DNA recovered with anti-FLAG antibody from wild-type and mutant fission yeast cells and whole cell extracts DNA were amplified by random priming and respectively labeled with Cy5 and Cy3. Labeled DNA samples were mixed and hybridized onto 44k pombe Agilent oligo arrays. Data were processed using Agilent scanner and Feature Extraction software.

2013-04-21 | E-GEOD-45378 | biostudies-arrayexpress

Functional characterization of WalRK: A two-component signal transduction system from Bacillus anthracis.

Project description: Not available

| S-EPMC3907690 | biostudies-literature