Genomics

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GPX8 regulates clear cell renal cell carcinoma tumorigenesis through promoting lipogenesis by NNMT


ABSTRACT: By analyzing RNAseq data from TCGA in ccRCC and metabolomics data from CCLE, we identified the strong correlation of GPX8 with the lipid and glycogen metabolism, which are highly upregulated in ccRCC. We validated this observation by knocking out GPX8 in Caki1 (ccRCC cell line). Using transcript profiling, we confirmed the association of GPX8 with de novo lipogenesis and suppressed fatty acid oxidation. Mechanically, from RNA-seq data we also found the decrease of NNMT upon GPX8 KO, which functions as the downstream of GPX8 and regulates the lipid phenotype in ccRCC.

ORGANISM(S): Homo sapiens

PROVIDER: GSE193249 | GEO | 2022/08/01

REPOSITORIES: GEO

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