Transcriptomics

Dataset Information

16

Functional genomic profiling of Aspergillus fumigatus biofilm reveals enhanced production of the mycotoxin gliotoxin


ABSTRACT: The opportunistic pathogenic mold Aspergillus fumigatus is an increasing cause of morbidity and mortality in immunocompromised and, in part, immunocompetent patients. Like bacteria or yeast, A. fumigatus can grow in multicellular communities by the formation of a hyphal network encased in an extracellular matrix. Here, we describe the proteome and transcriptome of planktonic and biofilm-grown A. fumigatus mycelium after 24h and 48h. A biofilm- and time-dependent regulation of many proteins and genes of the primary metabolism indicates a developmental stage of the young biofilm at 24h, which demands energy. At a matured biofilm phase, metabolic activity seems to be reduced. However, genes encoding hydrophobins and proteins involved in the biosynthesis of secondary metabolites were significantly upregulated. In particular, proteins of the gliotoxin secondary metabolite gene cluster were induced in biofilm cultures. This was confirmed by RT-PCR and by detection of this immunologically active mycotoxin in culture supernatants using HPLC analysis. The enhanced production of gliotoxin by in vitro formed biofilms reported here may play also a significant role under in vivo conditions. It may confer A. fumigatus protection from the host immune system and also enable its survival and persistence in chronic lung infections such as aspergilloma. Overall design: Comparison of biofilm and submers cultures at 24h and 48h after induction.

INSTRUMENT(S): JCVI PFGRC Aspergillus fumigatus 22K v3 array designed primarily based on strain Af293

ORGANISM(S): Aspergillus fumigatus  

SUBMITTER: Daniela Albrecht   

PROVIDER: GSE19430 | GEO | 2010-07-01

SECONDARY ACCESSION(S): PRJNA122297

REPOSITORIES: GEO

altmetric image

Publications

Sorry, this publication's infomation has not been loaded in the Indexer, please go directly to PUBMED or Altmetric.

Similar Datasets

2014-05-01 | E-GEOD-19430 | ArrayExpress
2012-03-02 | GSE27610 | GEO
2011-11-29 | GSE33254 | GEO
2015-11-24 | E-GEOD-60729 | ArrayExpress
| PRJNA122297 | ENA
2017-04-24 | PXD004034 | Pride
| GSE99966 | GEO
| GSE94818 | GEO
2018-12-03 | E-MTAB-5314 | ArrayExpress
2013-11-14 | E-MTAB-2028 | ArrayExpress