Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Whole genome bisulfite sequencing (WGBS) using porcine parthenogenetic embryos and biparental controls

ABSTRACT: The objective of this study was to, using porcine parthenogenetic embryos, investigate imprinting status of genes within the H19/IGF2 locus in chromosome 2.

ORGANISM(S): Sus scrofa

PROVIDER: GSE195527 | GEO | 2022/03/14

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

RNA-seq using porcine parthenogenetic embryos and biparental controls

Project description:The objective of this study was to, using porcine parthenogenetic embryos, investigate imprinting status of genes within the H19/IGF2 locus in chromosome 2.

2022-03-14 | GSE195526 | GEO

Whole genome bisulfite sequencing (WGBS) of porcine parthenogenetic embryos and wild-type controls.

Project description:The objective of this study was to, using porcine parthenogenetic embryos, investigate imprinting status of genes within the genomic region spans between the CALCR and ASB4 genes in chromosome 9.

2020-08-21 | GSE156439 | GEO

Porcine parthenogenetic embryos and biparental controls

Project description:Porcine parthenogenetic embryos and biparental controls

| PRJNA801127 | ENA

Tissue-Specific Transcriptional Profiling of Epigenetic Asymmetry in Porcine Parthenogenetic Fetuses1

Project description:Using two complementary approaches, analysis of imprinting of candidate genes by pyrosequencing and expression profiling of parthenogenetic fetuses, we carried a comprehensive survey of genomic imprinting in swine. In the case of imprinted genes where transcription of one of the two parental alleles is silenced, uniparental embryos like parthenotes can be used to measure transcript dosage effects. Using Affymetrix Porcine GeneChip microarrays, four tissues of day 30 fetuses were profiled: brain, fibroblast, liver, and placenta. Keywords: Transcriptional profiling of epigenetic asymmetry in porcine day 30 parthenogenetic and biparental fetal tissues

2009-02-06 | GSE10443 | GEO

RNA-seq of porcine parthenogenetic embryos and wild-type controls

2020-08-21 | GSE156629 | GEO

Tissue-Specific Transcriptional Profiling of Epigenetic Asymmetry in Porcine Parthenogenetic Fetuses1

2010-05-06 | E-GEOD-10443 | biostudies-arrayexpress

Whole genome bisulfite sequencing (WGBS) using porcine parthenogenetic embryos and biparental controls

Project description:Whole genome bisulfite sequencing (WGBS) using porcine parthenogenetic embryos and biparental controls

| PRJNA801131 | ENA

RNA sequencing data from parthenogenetic and biparental cells

Project description:Parthegenetic induced pluripotent stem cells (PgHiPSCs) were generated from parthenogenetic fibroblasts derived mature cystic ovarian teratoma. PgHiPSCs can be used in regenerative medicine, for analysis of genomic imprinting, to study imprinting-related development, and for disease modeling in humans.

2021-02-22 | GSE145706 | GEO

WGBS of parthenogenetic pig embryos

Project description:Porcine parthenogenetic embryos along with biparental control embryos were used to investigate imprinted genes in chromosome 11.

2023-03-04 | GSE218486 | GEO

RNA-seq of porcine parthenogenetic embryos

Project description:Porcine parthenogenetic embryos along with biparental control embryos were used to investigate imprinted genes in chromosome 11.

2023-03-04 | GSE218485 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data