Systematic comparison of tools used for m6A mapping from nanopore direct RNA sequencing

ABSTRACT: State-of-the-art algorithms for m6A detection and quantification via nanopore direct RNA sequencing have been continuously developed, little is known about their capacities and limitations, which makes a comprehensive assessment in urgent need. Therefore, we performed comprehensive benchmarking of 10 computational tools relying on current-based and base-calling “errors” strategies for m6A detection by nanopore sequencing.

ORGANISM(S): Mus musculus

PROVIDER: GSE195618 | GEO | 2023/03/01

REPOSITORIES: GEO