Transcriptomics

Dataset Information

0

ScRNAseq RAT DIA WT and DMD 12months


ABSTRACT: Duchenne muscular dystrophy (DMD) is a fatal muscle-wasting disorder caused by mutations in the Dystrophin gene with no therapeutic option. To bridge the gap between preclinical and therapeutic evaluation studies, we have generated a rat model for DMD that carries an exon 52 deletion (R DMDdel52) causing a complete lack of dystrophin protein. Here we show that R DMDdel52 animals recapitulated human DMD pathophysiological trajectory more faithfully than the mdx mouse model. We report that R DMDdel52 rats displayed progressive and severe skeletal muscle loss associated with fibrotic deposition, fat infiltration and fibre type switch. Early fibrosis was also apparent in the cardiac muscle. These histological modifications led to severe muscle, respiratory and cardiac functional impairments leading to premature death around one year. Moreover, DMD muscle exhibited systemic inflammation with a mixed M1/M2 phenotype. A comparative single cell RNAseq analysis of the diaphragm muscle was performed, revealing cellular populations alteration and molecular modifications in all muscle cell types. We show that DMD fibroadipogenic progenitors produced elevated levels of cartilage oligomeric matrix protein (COMP), a glycoprotein responsible for modulating homeostasis of extracellular matrix, and whose increased concentration correlated with muscle fibrosis both in R DMDdel52 rats and human patients. Fibrosis is a component of tissue remodelling impacting the whole musculature of DMD patients, at the tissue level but most importantly at the functional level. We therefore propose that this specific biomarker can optimize the prognostic monitoring of functional improvement of patients included in clinical trials.

ORGANISM(S): Rattus norvegicus

PROVIDER: GSE198237 | GEO | 2022/03/14

REPOSITORIES: GEO

Similar Datasets

2013-08-06 | E-GEOD-44096 | biostudies-arrayexpress
2023-09-30 | GSE237014 | GEO
2013-08-06 | GSE44096 | GEO
2020-01-09 | PXD016003 | Pride
2020-08-19 | PXD020566 | Pride
2024-05-11 | GSE241771 | GEO
2022-09-27 | GSE213925 | GEO
2022-11-22 | GSE218370 | GEO
2021-07-27 | GSE180771 | GEO
2020-02-05 | PXD014893 | Pride