Unknown

Dataset Information

52

Ath_Agilent_v2_Riechmann array expression profile AP1-GR ap1cal inflorescences - chx experiment


ABSTRACT: This experiment describes gene expression after the activation of APETALA1-GR, to study and identify AP1 target genes. We used a 35S:AP1-GR ap1 cal line to induce a synchronized response activating the AP1-GR fusion protein in ap1 cal inflorescence-like meristems through dexamethasone or dexamethasone+cycloheximide treatment. Tissue samples were collected at 3hrs after the treatment. The expression profiles of the individual samples were then analyzed by gene expression profiling using whole-genome oligonucleotide arrays (Agilent, custom-commercial). Overall design: We treated inflorescences of 35S:AP1-GR ap1-1 cal-1 plants with a dexamethasone-containing or a mock solution, or with identical solutions that contained in addition 10 μM cycloheximide. Tissue was collected 3 hours after the treatment. Samples from each of the four biological replicates resulted in a set of four hybridization pairs: Mock vs. Dex, Mock vs. Chx, Mock vs. Dex+Chx, and Chx vs. Dex+Chx. Dye polarities were switched between biological replicates.

INSTRUMENT(S): Arabidopsis thaliana 43.7K Ath_Agilent_v2_Riechmann

ORGANISM(S): Arabidopsis thaliana  

SUBMITTER: Jose Luis Riechmann  

PROVIDER: GSE20175 | GEO | 2011-01-01

SECONDARY ACCESSION(S): PRJNA125643

REPOSITORIES: GEO

Similar Datasets

2011-01-01 | E-GEOD-20175 | ArrayExpress
2010-04-02 | GSE20139 | GEO
2010-04-02 | GSE20182 | GEO
2010-04-02 | GSE20183 | GEO
2010-04-02 | E-GEOD-20139 | ArrayExpress
2010-04-02 | E-GEOD-20182 | ArrayExpress
2010-04-02 | E-GEOD-20183 | ArrayExpress
2018-05-29 | E-MTAB-6786 | ArrayExpress
| GSE69411 | GEO
2018-05-18 | E-MTAB-6786 | ExpressionAtlas