Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Methylome analysis of flowering branches building of Citrus plants induced by light drought (LD) condition [Bisulfite-Seq]

ABSTRACT: The changes of golbal DNA methylation level are relative to phenotypes transition of plant, expecially during producetive growth program. Therefore, we detect the grolbal DNA methlation and transcription level of stems after LD treated and CK group to compare the DNA methylomes difference between CK and LD group. The increase in DNA methylation level of LD group was correlated with decreased expression of DNA demethylase genes.There was a strong negative correlation between the genes expression level and methylation level of the flowering induction/flower development genes.

ORGANISM(S): Citrus unshiu

PROVIDER: GSE202926 | GEO | 2022/07/26

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Transcriptome analysis of flowering branches building of Citrus plants induced by light drought (LD) condition [RNA-seq]

Project description:To investigate the cooperation of light drought with flower branches building and flower bud formation in Citrus, we set two groups including 75 days light drought (LD) and CK to uncover which target genes relatived to flower bud and branches building have been influenced by LD. We then performed gene expression profiling analysis using data obtained from RNA-seq of two different treatment.

2022-07-26 | GSE202925 | GEO

Leishmania donovani Ld 39 strain:Ld 39

Project description:Leishmania donovani Ld 39 strain:Ld 39 Genome sequencing and assembly

| PRJNA176885 | ENA

Transcriptome and Methylome analysis of flowering branches building of Citrus plants induced by light drought (LD) condition

Project description:This SuperSeries is composed of the SubSeries listed below.

2022-07-26 | GSE202927 | GEO

Building chromosome-wide LD maps.

Project description: Not available

| S-EPMC2893229 | biostudies-literature

Epigenome analysis of pancreatic adenocarcinoma associated fibroblast cells.

Project description:Genome wide DNA methylation profiling of cancer associated fibroblasts. The hypothesis tested in the present study was that tumor induced DNA methylation in cancer associated fibroblasts. Results showed DNA methlation status in cancer associated fibroblasts changed after coculture with pancreatic cancer cells.

2016-11-23 | GSE80368 | GEO

Pancreatic cancer cells render metabolic reprogramming of tumor-associated macrophages through a GARP-dependent and DNA methylation-mediated mechanism

Project description:Genome wide DNA methylation profiling of cancer associated macrophages. Results showed DNA methlation status in M0 and M1-like macrophages changed after coculture with pancreatic cancer cells, but not in M2-like macrophages.

2021-11-03 | GSE121656 | GEO

Leishmania donovani Ld 2001

Project description:Leishmania donovani Ld 2001 Genome sequencing and assembly

| PRJNA171297 | ENA

Spiroplasma leptinotarsae strain:LD-1

Project description:Spiroplasma leptinotarsae LD-1 (ATCC 43213) genome sequencing

| PRJNA253348 | ENA

LBP resists hepatic oxidative stress by regulating LD homeostasis

Project description:we explored the novel role of Lipopolysaccharide-binding protein (LBP) as an anti-oxidant, which can capture unsaturated triglyceride (TG) into LDs to avoid lipid peroxidation. Oxidative stress upregulates LBP level and promotes LDs growth via the LBP/TG phase transition. Upon N-Acetyl-L-cysteine (NAC) elimination of ROS, LBP is exported from LD along with PRDX4, resulting in an increase in phospholipid synthesis. Chronic stress causes LBP upregulation and leads to obesity, which can be rescued by NAC treatment in vivo. These results support that LBP maintains homeostasis by coupling lipid metabolism and redox signal, which provides insights into redox medicine that mitigate stress-induced metabolic dysfunction.

2024-04-10 | PXD040940 | Pride

Gene expression profiling of Antarctic krill in LD condition

Project description:This work represents the first characterization of the krill circadian transcriptome under laboratory conditions and provides a first insight into the genetic regulation of physiological changes, which occur around the clock in light-dark (LD) and in constant darkness (DD) condition.

2019-10-01 | GSE94756 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data