Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The multiple roles of PehC during Ralstonia solanacerum infection

ABSTRACT: Here, we identified PehC, a Ralstonia protein belonging to the glycoside hydrolase family 28 (GH28), triggers typical immune responses in tomato and related Solanaceae plants as a novel microbe-associated molecular pattern (MAMP).

ORGANISM(S): Solanum lycopersicum

PROVIDER: GSE204888 | GEO | 2025/05/26

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	GSE204888_RAW.tar	Raw
	GSE204888_RNAseq_expression_matrix.xlsx	Xlsx
	filelist.txt	Txt

Items per page:

1 - 4 of 4

Similar Datasets

Comparative genomic hybridization by array of several Ralstonia solanacearum strains

Project description:Comparison of the gene content of several Ralstonia solanacearum strains, mainly belonging o the phylotype II; according to this pangenomic microarray, genes were deemed present or absent

2012-02-01 | E-MTAB-878 | biostudies-arrayexpress

RNA-seq of tomato leaves under JCK1241 treatment and/or Ralstonia solanacearum challenge

Project description:This study performed RNA sequencing (RNA-seq) of tomato (Solanum lycopersicum, cultivar Seokwang) leaves to investigate transcriptional responses under treatment with JCK1241 and/or challenge with the bacterial wilt pathogen Ralstonia solanacearum. A total of 12 samples were analyzed, including control, pathogen-infected, treatment-only, and combined treatment-plus-pathogen conditions

2025-08-28 | GSE306380 | GEO

N-terminome analysis of tomato P69D knock-out mutant total leaf proteomes treated with and without recominant P69D

Project description:The intercellular space or apoplast constitutes the main interface in plant-pathogen interactions. Apoplastic subtilisin-like proteases -subtilases- may play an important role in defence and they have been identified as targets of pathogen-secreted effector proteins. However, most evidence is limited to the interaction of plants with non-vascular foliar pathogens. Here, we characterise the role of the Solanaceae-specific P69 subtilase family in the interaction between tomato and the vascular bacterial wilt pathogen Ralstonia solanacearum.

2023-12-27 | PXD044637 | Pride

Comparison of tomato wild type and P69D knock-out mutant apoplast proteome and N-terminomes

2023-12-27 | PXD044635 | Pride

Expression analysis of Ralstonia solanacearum strain GMI1000 at 20°C and 28°C in rich medium (CPG) and in planta

Project description:Investigation of whole genome gene expression level changes in the bacterial wilt pathogen Ralstonia solanacearum, strain GMI1000 at 20°C and 28°C in culture and in planta. The tropical strain GMI1000 cannot wilt tomato plants at 20°C although it can cause full-blown disease at 28°C. A 16 array study using total RNA recovered from the following: 8 separate cultures of Ralstonia solanacearum strain GMI1000 grown in rich medium-CPG (4 grown at 20°C and 4 grown at 28°C) 8 separate in planta samples of Ralstonia solanacearum strain GMI1000 harvested from diseased tomato plants cv. BonnyBest (4 recovered from plants grown at 20°C and 4 from plants grown at 28°C) Each array (4-plex format) measures the expression level of 5061 genes from Ralstonia solanacearum strain GMI1000 with 2 to 6, 40-70 mer probes per gene, with two-fold technical redundancy. The arrays also contain probes for intergenic regions with no technical replicates.

2012-01-15 | E-GEOD-33657 | biostudies-arrayexpress

Expression analysis of Ralstonia solanacearum strain UW551 at 20°C and 28°C in rich medium (CPG) and in planta

Project description:Investigation of whole genome gene expression level changes in the bacterial wilt pathogen Ralstonia solanacearum, strain UW551 at 20°C and 28°C in culture and in planta. The temperatel strain UW551 can wilt and cause full-blown disease on tomato plants at 28°C as well as at 20°C. A 16 array study using total RNA recovered from the following: 8 separate cultures of Ralstonia solanacearum strain UW551 grown in rich medium-CPG (4 grown at 20°C and 4 grown at 28°C) 8 separate in planta samples of Ralstonia solanacearum strain UW551 harvested from diseased tomato plants cv. BonnyBest (4 recovered from plants grown at 20°C and 4 from plants grown at 28°C) Each array (4-plex format) measures the expression level of 4318 genes from Ralstonia solanacearum strain UW551 with 2 to 6, 40-70 mer probes per gene, with two-fold technical redundancy. The arrays also contain probes for intergenic regions with no technical replicates.

2012-01-15 | E-GEOD-33661 | biostudies-arrayexpress

ralstonia infection-characterisation of wat1 mutant

Project description:rs08-04_wat1-ralstonia - ralstonia infection - identification of the role of the plant cell wall in the interactions between plants and pathogenic agents - Comparison between the mutant and the wt at different time after infection with ralstonia bacteria Keywords: treated vs untreated comparison

2010-08-01 | GSE19081 | GEO

Expression data from Ralstonia solanacearum-inoculated tomato stem

Project description:Bacterial wilt caused by Ralstonia solanacearum is a lethal, soil-borne disease of tomato. Control of the disease with chemicals and crop rotation is insufficient, because the pathogen is particularly well adapted for surviving in the soil and rhizosphere. Therefore, cultivar resistance is the most effective means for controlling bacterial wilt, but the molecular mechanisms of resistance responses remain unclear. We used microarrays to obtain the characteristics of the gene expression changes that are induced by R. solanacearum infection in resistant cultivar LS-89 and susceptible cultivar Ponderosa.

2012-10-06 | GSE31807 | GEO

Expression analysis of Ralstonia solanacearum strain GMI1000 at 20°C and 28°C in rich medium (CPG) and in planta

2012-01-15 | GSE33657 | GEO

Expression analysis of Ralstonia solanacearum strain UW551 at 20°C and 28°C in rich medium (CPG) and in planta

2012-01-15 | GSE33661 | GEO