Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Dmrt1 regulates mouse expanded potency and facilitates the breaking of embryonic lineage barrier [ATAC-Seq]

ABSTRACT: ATAC-seq for E14 cells cultured in ES, 2iLIF and EPSCM;ATAC-seq was performed on cells E14 cells cultured in ES, 2iLIF and EPSCM

ORGANISM(S): Mus musculus

PROVIDER: GSE215142 | GEO | 2025/04/01

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Dmrt1 regulates mouse expanded potency and facilitates the breaking of embryonic lineage barrier [ChIP-Seq]

Project description:ChIP-seq for ES, 2iLIF, EPSC; Histone ChIP-seq was performed in E14 cells cultured in ES, 2iLIF and EPSCM

2025-04-01 | GSE215204 | GEO

Dmrt1 regulates mouse expanded potency and facilitates the breaking of embryonic lineage barrier [RNA-Seq]

Project description:RNA-seq for EPSCM; Bulk RNA-seq were performed on E14 cells cultured in ES, 2iLIF and EPSCM

2025-04-01 | GSE215141 | GEO

Dmrt1 regulates mouse expanded potency and facilitates the breaking of embryonic lineage barrier

Project description:This SuperSeries is composed of the SubSeries listed below.

2025-03-31 | GSE215205 | GEO

Dmrt1 regulates mouse expanded potency and facilitates the breaking of embryonic lineage barrier [ATAC-Seq]

Project description:Dmrt1 regulates mouse expanded potency and facilitates the breaking of embryonic lineage barrier [ATAC-Seq]

| PRJNA888991 | ENA

Transcription Factor Co-Expression Mediates Lineage Priming for Embryonic and Extra-Embryonic Differentiation [scRNA-Seq]

Project description:In this study, we characterised transcriptomes of mESC in different conditions EPSCM and KOSR subsetting them for their single expression of SOX2 or the double expression of SOX2 and GATA6 in these conditions. 2iLIF (sorted only by DAPI negative cells) were used as control.

2023-12-05 | GSE227888 | GEO

Comprehensive analysis of metabolic and mitochondrial characteristics of extraembryonic endoderm cells

Project description:The purpose of the study was to identify transcriptomic changes between feeder-free ES and XEN cells. ES cells were cultured feeder-free on 0.1% gelatin in 2iLIF in N2B27 media. XEN cells were also cultured feeder-free on 0.1% gelaton in RPMI1640 supplemented with 15% FBS, 2mM GlutaMAX and BME.

2020-10-22 | GSE159855 | GEO

Human pluripotent stem cell derived hematopoietic cells using expanded potential stem cell media

Project description:We recently developed a novel chemical media formulation, Expanded Potential Stem Cell Medium (EPSCM), that maintains mouse pluripotent stem cells (PSCs) in a unique cellular state that affords extraembryonic differentiation capacity. Here, we have used EPSCM to stably maintain human PSCs and used EPSCM-maintained iPSCs (EC-EPSCM) to study in vitro hematopoietic differentiation by embryoid body (EB) formation. We found that human PSCs maintained in EPSCM can spontaneously form embryoid bodies and efficiently undergo in vitro hematopoiesis using a simple differentiation protocol. EC-EPSCM PSCs generated primitive-wave and definitive-wave hematopoietic cells, which were chracterized by RNA-sequencing analysis.

2022-04-26 | GSE130662 | GEO

Dmrt1 regulates mouse expanded potency and facilitates the breaking of embryonic lineage barrier

Project description:Dmrt1 regulates mouse expanded potency and facilitates the breaking of embryonic lineage barrier

| PRJNA889339 | ENA

ATAC-seq and H4K16ac ChIP-seq profiles of E14 ES cells treated with cycloheximide

Project description:ATAC-seq and H4K16ac ChIP-seq profiles of E14 ES cells before and after treatment with cycloheximide (CHX, 1 ug/ml) for 3 hours.

2017-07-23 | GSE98358 | GEO

ATAC-seq in WT, SAGA and ATAC mutant mouse embryonic stem cells

Project description:Assess chromatin accessibility in WT and mutant ES E14 strains using ATAC-seq. Mutant strains are depleted for subunits of the coactivator complexes SAGA (Supt7l KO) or ATAC (Yeats2, Zzz3) using constitutive knock-out (KO) or the auxin-inducible degron (AID) system.

2021-08-03 | GSE175902 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data