Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E. coli K-12 mutant yjgI biofilm vs. wild type biofilm

ABSTRACT: The gene expression of glasswool biofilm cells in E. coli yjgI mutant vs. E. coli wild type strain in LB.

ORGANISM(S): Escherichia coli

PROVIDER: GSE22057 | GEO | 2011/05/29

SECONDARY ACCESSION(S): PRJNA128971

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

E. coli K-12 mutant yjgI biofilm vs. wild type biofilm

Project description:The gene expression of glasswool biofilm cells in E. coli yjgI mutant vs. E. coli wild type strain in LB. Strains: E. coli K12 BW25113 wild type, yjgI mutant Medium: LB Biofilm grown on glass wool Time: 15 h Cell type: biofilm

2011-05-29 | E-GEOD-22057 | biostudies-arrayexpress

E. coli K-12 mutant ycfR biofilm vs wild type 15 hr LB glu biofilm cells

2006-09-26 | GSE5904 | GEO

E. coli K-12 10 uM 5-fluorouracil biofilm vs. E. coli K-12 DMF biofilm

2009-01-02 | GSE12750 | GEO

E. coli K-12 wild type with R1drd19 biofilm vs wild type without R1drd19 biofilm

2008-03-19 | GSE6923 | GEO

Transcription profiling of E. coli K-12 biofilm, treated with 10 uM 5-fluorouracil vs. E. coli K-12 DMF treated biofilm

Project description:E. coli K-12 ATCC 25404 in LB medium with 5-fluorouracil 10 uM biofilm cells relative to E. coli K-12 ATCC 25404 in LB DMF biofilm cells. The same amount of stock 5-fluoroacil stock solution (0.1% of the volume) was added as DMF into the LB DMF. Experiment Overall Design: Strain: E. coli K-12 ATCC 25404 wild-type Experiment Overall Design: Medium: LB Experiment Overall Design: Biofilm growth on glass wool Experiment Overall Design: Time: 24 h Experiment Overall Design: Cell type: biofilm Experiment Overall Design: 5-fluorouracil vs. DMF

2009-01-09 | E-GEOD-12750 | biostudies-arrayexpress

Transcription profiling of E. coli K-12 mutant ycfR biofilm vs wild type 15 hr LB glu biofilm cells

Project description:E. coli K-12 BW25113 mutant strain ycfR expression in biofilm cells relative to E. coli wild-type strain expression in biofilm cells. All samples cultured in LB glu with glass wool Experiment Overall Design: Strains: E. coli K-12 BW25113 wild type and mutant ycfR Experiment Overall Design: Medium: LB glu Experiment Overall Design: Biofilm grown on glass wool Experiment Overall Design: Time: 15 hr Experiment Overall Design: Cell type: biofilm

2008-06-14 | E-GEOD-5904 | biostudies-arrayexpress

E. coli BW25113 ompA mutant vs wild type biofilm and E. coli BW25113 ompA/pCA24N_ompA vs ompA/pCA24N suspension cells

Project description:This Series involves two studies: 1) The gene expression of E. coli K-12 BW25113 ompA mutant strain vs. wild type strain glasswool biofilm cells and E. coli K-12 BW25113 ompA mutant vs. wild type polystyrene biofilm cells. 2) The gene expression of E. coli BW25113 ompA/pCA24N_ompA vs. ompA/pCA24N suspension cells. Strains: E. coli K-12 BW25113 wild type, ompA mutant Medium: LB Cell type: Biofilm cells grown on glasswool and polystyrene surfaces Time: 15 h Temperature: 37C Strains: BW25113 ompA/pCA24N_ompA and ompA/pCA24N Medium: LB Time: 7 h Temperature: 37C Cell type: suspension cells, induced by 0.1 mM IPTG

2010-11-03 | E-GEOD-14064 | biostudies-arrayexpress

Transcription profiling of E. coli K-12 wild type with R1drd19 biofilm vs wild type without R1drd19 biofilm

Project description:E. coli K-12 wild type strains gene expression in biofilm cells with R1drd19 relative to that in biofilm cells of E. coli K-12 wild type strains without R1drd19. All the samples were cultured in LB or M9C glu on glass wool at different time. Experiment Overall Design: Strains: E. coli K-12 strains with and without R1drd19 respectively; Experiment Overall Design: Medium: LB was used for BW25113 strains, and M9C glu was used for MG1655 strains; Experiment Overall Design: Biofilm grown on glass wool; Experiment Overall Design: Time: 7h, 15h, 24h respectively; Experiment Overall Design: Cell type: biofilm.

2008-04-05 | E-GEOD-6923 | biostudies-arrayexpress

E. coli BW25113 ompA mutant vs wild type biofilm and E. coli BW25113 ompA/pCA24N_ompA vs ompA/pCA24N suspension cells

2010-01-20 | GSE14064 | GEO

P. aeruginosa PA14 mutant PA4496 biofilm vs wild-type biofilm

Project description:P. aeruginosa PA14 mutant strain PA4496 expression in biofilm cells relative to PA14 wild-type strain expression in biofilm cells. All samples cultured in LB with glass wool

2018-02-14 | GSE24638 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data