Genomics

Dataset Information

0

Anti-miR-93-5p therapy prolongs sepsis survival by restoring the peripheral immune response


ABSTRACT: Sepsis remains a leading cause of death and currently has no pathogenesis-specific therapy. Hampered progress is partly due to the lack of insight into deep mechanistic processes. Deciphering the functions of microRNAs in sepsis pathogeny became a dynamic research topic in the last decade. To screen for new microRNA targets for sepsis therapeutics, we used human samples: microRNA array data from peripheral blood mononuclear cells (PBMCs) from sepsis patients and controls, whole blood samples from sepsis survivors; and multiple animal models: mouse cecum ligation-puncture (CLP)-induced sepsis, mouse viral microRNA challenge, and baboon Gram-positive and Gram-negative sepsis models. miR-93-5p met the criteria for a therapeutic target, being overexpressed in baboons which died early after induction of sepsis and downregulated in humans who survived after sepsis. Therapeutically, inhibiting miR-93-5p prolonged the overall survival of mice with CLP-induced sepsis, with a stronger effect in old mice. Mechanistically, anti-miR-93-5p therapy reduced inflammatory monocytes and increased circulating effector memory T cells, especially CD4+ subset. Ago2-immunoprecipitation in miR-93-knockout T cells identified important regulatory receptors, CD28 and CD160, as direct miR-93-5p target genes. In conclusion, miR-93-5p is a potential therapeutic target in sepsis in the elderly through its regulation of both innate and adaptive immunity. We applied the Ago2-RIP Chip (Ribonucleoprotein ImmunoPrecipitation followed by microarray analysis) to identify miR-93-5p target mRNAs. This methodology uses beads coupled to either anti-Ago2 antibody (or an IgG control) to pull down the RISC complex together with any miRNA-interacting mRNAs. To define target genes of miR-93-5p, we assessed mRNA transcripts enriched in the Ago2-IP fraction of JURKAT parental cells or control cells (where miR-93-5p is present) but not in the two KO clones (where miR-93-5p is absent) by microarray

ORGANISM(S): Homo sapiens

PROVIDER: GSE223458 | GEO | 2023/06/13

REPOSITORIES: GEO

Similar Datasets

2019-01-12 | GSE93553 | GEO
2022-08-03 | GSE210335 | GEO
2021-09-08 | PXD013987 | Pride
2020-09-18 | PXD020795 | Pride
2019-04-24 | PXD013054 | Pride
2022-02-23 | GSE188874 | GEO
2014-12-22 | E-GEOD-62677 | biostudies-arrayexpress
2014-12-22 | E-GEOD-62675 | biostudies-arrayexpress
2020-01-13 | GSE140069 | GEO
2014-12-20 | E-GEOD-34790 | biostudies-arrayexpress