Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genetic and dietary modulators of inflammation in the gastro-intestinal tract of BXD genetic reference population

ABSTRACT: Transcriptome data measured by microarray in colon of the BXD mouse genetic diversity model under a standard chow or a high fat diet at a fastd state.

ORGANISM(S): Mus musculus

PROVIDER: GSE225791 | GEO | 2023/08/25

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Global brown adipose transcript data from fasted male BXD strains on chow diet

2014-09-26 | GSE60150 | GEO

Global hepatic transcript data from fasted male BXD strains on chow or high fat diet

2014-09-11 | GSE60149 | GEO

Global heart transcript data from fasted male BXD strains on chow or high fat diet

Project description:Transcript data from heart tissue from fasted-state male BXD strains on chow or high fat diet We used microarrays to compare the heart expression differences across the BXD strain family and across two diverse diets

2017-08-31 | GSE60489 | GEO

Global quadriceps skeletal muscle transcript data from fasted male BXD strains on chow or high fat diet

2014-09-26 | GSE60151 | GEO

Global subcutaneous white adipose tissue (scWAT) transcript data from fasted male BXD strains on chow or high fat diet

Project description:Transcript data from subcutaneous white adipose tissue (scWAT) from fasted-state male BXD strains on chow or high fat diet We used microarrays to compare the subcutaneous white adipose tissue (scWAT) expression differences across the BXD strain family and across two diverse diets

2019-03-08 | GSE79016 | GEO

Global hepatic transcript data from fed male BXD strains on chow or high fat diet

Project description:Gene expression levels assessed by microarray in liver samples collected from the BXD mouse genetic diversity model fed either a standard chow or a high fat diet at a fed state.

2022-09-27 | GSE188764 | GEO

BXD Mouse Liver Metabolome - Aging Colony

Project description:Metabolome analysis of Mouse BXD reference collection. Liver extracts. Chow and high fat diet. Flow injection analysis - TOF (negative mode, no LC!). Sample description is included in file_description.csv. Complete details are in the manuscript "Multiomic Profiling of the Liver Across Diets and Age in a Diverse Mouse Population" (Williams et al., Cell Systems, 2021)

2017-08-14 | MSV000081441 | MassIVE

Global brown adipose transcript data from fasted male BXD strains on chow diet

Project description:Transcript data from brown adipose tissue from fasted-state male BXD strains on chow or high fat diet We used microarrays to compare the brown adipose expression differences across males from the BXD strain family and across two diverse diets 29-week-old male mice were fasted overnight (6pm-9am), anesthetized under isoflurane, and perfused, then brown adipose tissue was snap-frozen in liquid nitrogen for RNA extraction and RNEasy cleanup. Each dietary and strain cohort consisted of ~5 animals which were prepared independently then pooled evenly by M-BM-5g RNA before the Affymetrix arrays were run.

2014-09-26 | E-GEOD-60150 | biostudies-arrayexpress

Global hepatic transcript data from fasted male BXD strains on chow or high fat diet

Project description:Transcript data from livers from fasted-state BXD strains on chow or high fat diet We used microarrays to compare the hepatic expression differences across the BXD strain family and across two diverse diets 29-week-old male mice were fasted overnight (6pm-9am), anesthetized under isoflurane, and perfused, then livers were snap-frozen in liquid nitrogen for RNA extraction and RNEasy cleanup. Each dietary and strain cohort consisted of ~5 animals which were prepared independently then pooled evenly by M-BM-5g RNA before the Affymetrix arrays were run.

2014-09-11 | E-GEOD-60149 | biostudies-arrayexpress

Global quadriceps skeletal muscle transcript data from fasted male BXD strains on chow or high fat diet

Project description:Transcript data from quadriceps skeletal muscle from fasted-state male BXD strains on Quadriceps, Chow or Quadriceps, High fat diet We used microarrays to compare the skeletal muscle expression differences across males in the BXD strain family and across two diverse diets 29-week-old male mice were fasted overnight (6pm-9am), anesthetized under isoflurane, and perfused, then quadriceps were snap-frozen in liquid nitrogen for RNA extraction and RNEasy cleanup. Each dietary and strain cohort consisted of ~5 animals which were prepared independently then pooled evenly by M-BM-5g RNA before the Affymetrix arrays were run.

2014-09-26 | E-GEOD-60151 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data