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Dual-species microarray for assessing gene expression in stromal microenvironment, cancer cells and their interactions (v1 array)

ABSTRACT: Design a human-mouse dual-species microarray to provide a technology for investigation of cancer-stromal interaction in xenograft model.

ORGANISM(S): Mus musculus Homo sapiens

PROVIDER: GSE23054 | GEO | 2010/07/22

SECONDARY ACCESSION(S): PRJNA133117

REPOSITORIES: GEO

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Dual-species microarray for assessing gene expression in stromal microenvironment, cancer cells and their interactions (v1 array)

Project description:Design a human-mouse dual-species microarray to provide a technology for investigation of cancer-stromal interaction in xenograft model. Reference RNA from human and mouse were labeled using Cy5, while the mixture of human and mouse RNA were labeled using Cy3. Samples were hybridized on customized-commercial array with Agilent probes and user-designed species-specific probes (Human-mouse dual-species array HomoMusArray v1).

2010-07-22 | E-GEOD-23054 | biostudies-arrayexpress

Dual-species microarray for assessing gene expression in stromal microenvironment, cancer cells and their interactions (v2 array)

Project description:Design a human-mouse dual-species microarray to provide a technology for investigation of cancer-stromal interaction in xenograft model. The 2 reference RNA were used to evaluate and identify probes with potential the cross-species hybridization, so that we can label these probes and exclude them before analysis of biological samples/data. Reference RNA from human and mouse were labeled using Cy3. Samples were hybridized on customized-commercial array with Agilent probes and user-designed species-specific probes (Human-mouse dual-species array HomoMus_v2). This array is designed and improved from hte first version GPL10714

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Project description:This SuperSeries is composed of the following subset Series: GSE23054: Dual-species microarray for assessing gene expression in stromal microenvironment, cancer cells and their interactions (v1 array) GSE23364: Dual-species microarray for assessing gene expression in stromal microenvironment, cancer cells and their interactions (v2 array) Refer to individual Series

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Dual-species microarray for assessing gene expression in stromal microenvironment, cancer cells and their interactions (v1 array)

Project description:Dual-species microarray for assessing gene expression in stromal microenvironment, cancer cells and their interactions (v1 array)

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Dual-species microarray for assessing gene expression in stromal microenvironment, cancer cells and their interactions

Project description:This SuperSeries is composed of the SubSeries listed below.

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