Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The MAPKinase TMK3 in Trichoderma reesei

ABSTRACT: We investigated the functions of the HOG pathway MAPKinase tmk3 = TR_45018 in Trichoderma reesei

ORGANISM(S): Trichoderma reesei

PROVIDER: GSE236209 | GEO | 2025/12/31

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	GSE236209_QM6a_transcript_seq.fa.gz	Other
	GSE236209_featurecounts_tmk3_GEO_230628.xlsx	Xlsx

Items per page:

1 - 3 of 3

Similar Datasets

The HOG and pheromone pathway MAPKinase-kinases (MAPKK) TR80186 and TR21168 in Trichoderma reesei

Project description:We investigated the functions of the MAPKKs 80186 in the HOG pathway and of 21168 in the pheromone pathwahy in Trichoderma reesei

2025-12-31 | GSE236211 | GEO

The HOG pathway MAPKKK TR_57513 in Trichoderma reesei

Project description:We investigated the functions of the MAPKKK (TR_57513) from the HOG pathway in Trichoderma reesei

2025-12-31 | GSE236210 | GEO

The role of protein phosphatases in cellulase regulation in Trichoderma reesei

Project description:We investigated the functions of three different protein phosphatases, pp2a, pph5 and pph5-2 in Trichoderma reesei

2025-12-31 | GSE238246 | GEO

A G-protein coupled receptor supports methionine response in Trichoderma reesei

Project description:We investigated the function of the G-protein coupled receptor 72004 in Trichoderma reesei and found that it is involved in methionine response and gene expression in light and darkness

2024-01-01 | GSE222724 | GEO

The role of the SOR-cluster transporter sor4 in light and darkness in Trichoderma reesei

Project description:We investigated the function of the transporter sor4 (TR_43701) on cellulose in light and darkness in Trichoderma reesei

2025-12-31 | GSE238248 | GEO

Trichoderma reesei QM6a CGH self hybridization

Project description:We perform a self hybridisation comprative genomic hybridization (CGH) in order to validate the probe tiling design we done on Trichoderma reesei. This hybridization was done using QM6a wild type strain.

2010-03-16 | GSE17752 | GEO

Trichoderma reesei QM6a CGH self hybridization

2010-06-23 | E-GEOD-17752 | biostudies-arrayexpress

Systemic analysis of lactose metabolism in Trichoderma reesei identifies a lactose permease that is essential for cellulase induction

Project description:Lactose (1,4-0-ß-d-galactopyranosyl-d-glucose), a by-product from cheese manufacture or whey processing industries, is known to induce the formation of plant biomass hydrolyzing enzymes needed for the biorefinery industry in the fungus Trichoderma reesei, but the reason for this induction and the underlying mechanism are not fully understood. Here, we used systems analysis of the Trichoderma reesei transcriptome during utilization of lactose. We found that the respective CAZome encoded glycosyl hydrolases specifically tailored for the attack of monocotyledon xyloglucan. In addition, genes for a high number of putative transporters of the major facilitator superfamily were also induced. Systematic knock out of them identified a gene whose knock-out completely impaired lactose utilization and cellulase induction in Trichoderma reesei. These data shed new light on the mechanism by which Trichoderma reesei metabolizes lactose and illuminate the key role of ß-D-galactosides in habitat specificity of this fungus.

2013-06-30 | GSE39276 | GEO

Systemic analysis of lactose metabolism in Trichoderma reesei identifies a lactose permease that is essential for cellulase induction

Project description:Lactose (1,4-0-M-CM-^_-d-galactopyranosyl-d-glucose), a by-product from cheese manufacture or whey processing industries, is known to induce the formation of plant biomass hydrolyzing enzymes needed for the biorefinery industry in the fungus Trichoderma reesei, but the reason for this induction and the underlying mechanism are not fully understood. Here, we used systems analysis of the Trichoderma reesei transcriptome during utilization of lactose. We found that the respective CAZome encoded glycosyl hydrolases specifically tailored for the attack of monocotyledon xyloglucan. In addition, genes for a high number of putative transporters of the major facilitator superfamily were also induced. Systematic knock out of them identified a gene whose knock-out completely impaired lactose utilization and cellulase induction in Trichoderma reesei. These data shed new light on the mechanism by which Trichoderma reesei metabolizes lactose and illuminate the key role of M-CM-^_-D-galactosides in habitat specificity of this fungus. We used two biological replicas of Trichoderma reesei growing on lactose, glucose and glycerol

2013-06-30 | E-GEOD-39276 | biostudies-arrayexpress

ArrayCGH of Trichoderma reesei strains QM9123, QM9414, NG14 and RutC-30

Project description:Trichoderma reesei is the main industrial producer of cellulases and hemicellulases used to depolymerize biomass in many biotechnical applications. Many production strains in use have been generated by classical mutagenesis. In this study we characterized genomic alterations in hyperproducing mutants of T. reesei by high-resolution comparative genomic hybridisation tiling array. We carried out aCGH analysis of four hyperproducing strains (QM9123, QM9414, NG14 and RutC-30) using QM6a genome as a reference. ArrayCGH analysis identified dozens of mutations in each strain analyzed.

2010-11-26 | GSE19606 | GEO