Longitudinal scRNA-seq of murine T cell transfer colitis

ABSTRACT: In order to describe in detail the processes involved in chronic colitis, we performed scRNA-seq at multiple time points in CD45RBhi T cell transfer colitis mouse models. These data were compared to bulk RNAseq and spatial transcriptomics results from the same mice within the same study. scRNAseq data were analyzed by annotating cell clusters and comparing proportions and gene expression programs over time.

ORGANISM(S): Mus musculus

PROVIDER: GSE236889 | GEO | 2026/04/28

REPOSITORIES: GEO