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Investigation of the usefulness of liver-specific deconvolution method toward legacy data utilization


ABSTRACT: Deconvolution is a methodology for estimating the immune cell proportions from the transcriptome. It is mainly applied to blood-derived samples and tumor tissues. However, the influence of tissue-specific modeling on the estimation results has rarely been investigated. In this study, we constructed a system to evaluate the performance of the deconvolution method on liver transcriptome data. Correspondence: Tadahaya Mizuno

ORGANISM(S): Mus musculus

PROVIDER: GSE237801 | GEO | 2023/07/31

REPOSITORIES: GEO

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