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Thermoanaerobacter sp. X514 in various carbon sources

ABSTRACT: The sugar metabolic mechanism on glucose, xylose, fructose and cellobiose as the sole or dual carbon source by Thermoanaerobacter sp. X514 was characterized by whole genome cDNA micorarrays.

ORGANISM(S): Thermoanaerobacter sp. X514

PROVIDER: GSE24458 | GEO | 2011/02/01

SECONDARY ACCESSION(S): PRJNA132701

REPOSITORIES: GEO

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Thermoanaerobacter sp. X514 in various carbon sources

Project description:The sugar metabolic mechanism on glucose, xylose, fructose and cellobiose as the sole or dual carbon source by Thermoanaerobacter sp. X514 was characterized by whole genome cDNA micorarrays. In this study, X514 cell grew in difeined medium supplement with different carbohydrates. Each sample was prepared harvested at early-, mid- and late-log phases respectively. Samples were used to acquire expression profiles of total 2322 unique genes, leading to metabolic mechanism construction.

2011-02-01 | E-GEOD-24458 | biostudies-arrayexpress

Comparison of Thermoanaerobacter sp. X514 grown on different xylose concentrations

Project description:Thermoanaerobacter sp. X514 was grown on 1, 10, 50 and 200 mM xylose in order to identify pathways and transporters responsible for xylose transport and conversion to ethanol.

2011-11-02 | GSE31521 | GEO

the transcript profiles of Thermoanaerobacter sp. X514 (wild type) and its ethanol tolerant mutants (Xm and Xe) with or without ethanol

Project description:The ethanol shock and stress response mechanisms by Thermoanaerobacter sp. X514 (wt) and mutants (Xm and Xe) were characterized by whole genome cDNA micorarrays.

2013-06-01 | GSE32630 | GEO

Comparison of Thermoanaerobacter pseudethanolicus 39E grown on different xylose concentrations

Project description:Thermoanaerobacter pseudethanolicus 39E was grown on 10, 50 and 200 mM xylose in order to identify pathways and transporters responsible for xylose transport and conversion to ethanol.

2011-11-02 | GSE31522 | GEO

Aspergillus niger mutants: induction by various carbon sources

Project description:This SuperSeries is composed of the following subset Series: GSE37758: Aspergillus niger : Control (fructose) vs. steam-exploded sugarcane induction (SEB) GSE37760: Aspergillus niger : Control (fructose) vs. xylose + arabinose (XA) Refer to individual Series

2012-05-06 | E-GEOD-37795 | biostudies-arrayexpress

the transcript profiles of Thermoanaerobacter sp. X514 (wild type) and its ethanol tolerant mutants (Xm and Xe) with or without ethanol

Project description:The ethanol shock and stress response mechanisms by Thermoanaerobacter sp. X514 (wt) and mutants (Xm and Xe) were characterized by whole genome cDNA micorarrays. In this study, X514 (wt) and mutants (Xm and Xe) cell grew in difeined medium supplement with 50mM glucose under different ethanol treatment. Each sample was prepared harvested at different treated times respectively. Samples were used to acquire expression profiles of total 2322 unique genes, leading to metabolic mechanism construction.

2013-06-01 | E-GEOD-32630 | biostudies-arrayexpress

Expression analysis of Clostridium acetobutylicum ATCC 824 grown on different carbohydrates

2010-05-15 | GSE18471 | GEO

Thermoanaerobacter sp. X514

Project description:Comparison of Thermoanaerobacter sp. X514 grown on different xylose concentrations

| PRJNA145511 | ENA

Expression analysis of Clostridium acetobutylicum ATCC 824 grown on different carbohydrates

Project description:Investigation of whole genome gene expression levels in Clostridium acetobutylicum strain 824 grown individually on starch, galactose, lactose, mannose, fructose, glucose, arabinose, xylose, cellobiose, maltose, sucrose A 33 array study using total RNA recovered from three separate wild-type cultures of Clostridium acetobutylicum 824 grown on each of the following sugars: starch, galactose, lactose, mannose, fructose, glucose, arabinose, xylose, cellobiose, maltose, sucrose. RNA extraction, cDNA production, and labeling were performed independently on three separate cultures for each carbohydrate. Each independent sample was hybridized to one array equating to one technical replicate for each biological sample and three biological replicates for each condition tested. Each array contains 2 replicates of 9 probes approximately 60 bp in length for each of the 3,842 open reading frames annotated in the C. acetobutylicum 824 genome.

2010-05-15 | E-GEOD-18471 | biostudies-arrayexpress

Biosynthesis of membrane-spanning lipids in Thermoanaerobacter ethanolicus

Project description:This study was conducted to identify the genes involved in the synthesis of membrane-spanning lipids in Thermoanaerobacter ethanolicus JW 200.

2022-10-26 | GSE211546 | GEO

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