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Evaluation and optimization of sequence-based gene regulatory deep learning models


ABSTRACT: As training dataset for Random Promoter DREAM Challenge 2022, we generated ~6.7 million synthetic promoters (in yeast) comprised of random DNA (N80) and measured their expression by FACS (sorting into 18 bins). As test dataset for Random Promoter DREAM Challenge 2022, we generated ~71k synthetic promoters (in yeast) comprised of designed DNA (NBT) and measured their expression by FACS (sorting into 18 bins).

ORGANISM(S): Saccharomyces cerevisiae

PROVIDER: GSE254493 | GEO | 2024/02/03

REPOSITORIES: GEO

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