Transcriptomics

Dataset Information

28

Gene expression analysis of Vancomycin resistance in Stapyloccoccus aureus strains: 2275, 2279, 2276, 2277, 2278, and 2283.


ABSTRACT: Understanding novel mechanism bacteria ustilize in the clinics to become resistant to antibiotics is critical. The study aims to identify genes associated with Vancomycin resistance. Clinical isolates from a single patient with increasing resistance to vancomycin were grown in the presence and absence of vancomycin.Staphylococcus aureus strain 2275 is the reference for this series. Overall design: S. aureus isolates from a single patient were grown in the presence and absence of vancomycin over a 2 hour time course. RNA samples were extracted at 30, 60 90 and 120 minutes post exposure to antibiotic. Samples were hybridized on aminosilane coated slides with 70-mer oligos comparing mock treated and treated cells to the first strain isolated in the lineage. Differnetial gene expression patterns were determined.

INSTRUMENT(S): JCVI PFGRC Staphylococcus aureus 16K v9 array designed primarily based on strain USA300

ORGANISM(S): Staphylococcus aureus  

SUBMITTER: PFGRC JCVI  

PROVIDER: GSE26353 | GEO | 2011-04-08

SECONDARY ACCESSION(S): PRJNA136735

REPOSITORIES: GEO

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