Transcriptomics

Dataset Information

0

CD4+/CD8+ selection of anti-AML engager T cells alters their manufacturing environment, transcriptome, and functional phenotype


ABSTRACT: Immunotherapies have shown efficacy against some cancers. Despite initial clearance, relapse rates are high, demanding product improvement. A variety of manufacturing methods protocols are used to generate therapeutic engineered T-cells; these differ in T-cell isolation, activation, and genetic modification, and other methodology. We sought to determine how manufacturing differencespre-selection affected the phenotype of T cells engineered to secrete a CD123xCD3 bispecific engager molecule (ENG-T). These cells were designed to treat acute myeloid leukemia (AML). We evaluated the effect of T-cell selection on transduction efficiency, T-cell activation, short- and long-term anti-AML cytotoxicity, and gene transcription. Unselected, CD4, CD8, and CD4/CD8-selected ENG-T cells had minor differences in immunophenotype but demonstrated equivalent activation and cytotoxicity in short-term assays. While unselected and CD4/CD8-selected ENG-T cells appeared similar phenotypically prior to target cell exposure, serial stimulation in vitro showed CD4/CD8-selection supported sustained ENG-T survival. Likewise, CD4 and CD4/CD8-selected ENG-T cells displayed superior anti-tumor efficacy and murine survival in AML xenografts. Unselected ENG-T cells were found to be exposed to inflammatory cytokines during early manufacture with transcriptional analysis revealing upregulation of intracellular inflammatory pathways. This early activation likely underpins long-term observed functional differences. Pre-selection of T-cell products should therefore be strongly considered to enhance the quality of clinical cell therapies.

ORGANISM(S): Homo sapiens

PROVIDER: GSE277096 | GEO | 2025/09/12

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

| PRJNA1160783 | ENA
2009-06-01 | E-GEOD-14926 | biostudies-arrayexpress
2019-09-05 | GSE100519 | GEO
2013-08-20 | E-GEOD-50008 | biostudies-arrayexpress
2008-06-16 | E-GEOD-9476 | biostudies-arrayexpress
2020-10-25 | GSE149207 | GEO
2012-06-30 | E-GEOD-38909 | biostudies-arrayexpress
2012-06-29 | E-GEOD-36409 | biostudies-arrayexpress
2025-03-09 | GSE255491 | GEO
2025-03-09 | GSE255258 | GEO