Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNAseq from seeds of tomato cultivars microtom (uTom), Criollo (Cr) and Stupicke (St) treated with 48h osmopriming (PEG 8000, -1 MPa) with MeJA 2mM or water control

ABSTRACT: RNAseq from seeds of tomato cultivars microtom (uTom), Criollo (Cr) and Stupicke (St) treated with 48h osmopriming (PEG 8000, -1 MPa) with MeJA 2mM or water control. Seeds were dried for 2 days prior to RNA extraction.

ORGANISM(S): Solanum lycopersicum

PROVIDER: GSE277291 | GEO | 2025/09/01

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

RNAseq from seeds of tomato cultivars microtom (uTom), Criollo (Cr) and Stupicke (St) treated with 48h osmopriming (PEG 8000, -1 MPa) with MeJA 2mM or water control

Project description:RNAseq from seeds of tomato cultivars microtom (uTom), Criollo (Cr) and Stupicke (St) treated with 48h osmopriming (PEG 8000, -1 MPa) with MeJA 2mM or water control

| PRJNA1161660 | ENA

MeJA treatment in sugarcane

Project description:Using nylon filter arrays, we analyzed the expression profile of 1536 expressed sequence tags (ESTs) of sugarcane (Saccharum sp.) exposed to the phytormone methyl jasmonate (MeJA) for 0-12 h. 26 ESTs were differentially expressed, including novel genes and also genes that had not previously been reported as being MeJA-inducible. Data are for two independent experiments. Keywords = sugarcane Keywords = methyl jasmonate Keywords = nylon arrays Keywords: time-course

2004-07-23 | GSE1546 | GEO

MeJA-induced gene expression in rice plants

Project description:To understand signal transduction mechanism by MeJA in rice, we have analyzed transcription profile with 60K Rice Whole Genome Microarray after MeJA treatment. Gene transcripts were extracted from ten individual rice plants treated with 100 uM MeJA for 6 hrs. RNA samples from these plants were used to generate cyanine-3 (Cy3) and Cy5-labeled complementary DNA (cDNA) probes, which were then hybridized to the microarray. Each data set was obtained from three biological repeats independently.

2011-01-01 | GSE22757 | GEO

MeJA treatment in sugarcane

2010-10-08 | E-GEOD-1546 | biostudies-arrayexpress

Microarray analysis of transcriptional changes in MeJA-treated tobacco leaves

Project description:Using this microarray data, we identified 19898 probes (717 upregulated and 1512 downregulated in the mock- and MeJA-treated leaf samples at ‘1wk’ and ‘2wk’ stages; 17669 with differential expression in these samples), compared with the mock-treated sample at ‘0wk’ stage. This work aims to identify the genes related to MeJA-induced senescence of tobacco whole-plant, and found several genes differentially expressed between the mock- and MeJA-treated samples at the same stage.

2022-05-31 | GSE182794 | GEO

GNPS - LC-MS/MS metabolomic analyses in Solanum lycorpersycum seed exudates - control and MeJA priming - GNPS

Project description:Solanum lycopersicum Stupicke, Criollo and Micro-Tom genotypes were used in this study. Some seeds of these accessions were subjected to priming treatment with MeJA. Seeds exudates were collected from MeJA-treated and untreated (control) seeds and subjected to LC-MS/MS metabolomic analyses.

2024-11-28 | MSV000096553 | GNPS

Analysis of gene expression patterns of Arabidopsis roots grown in methyl jasmonate (MeJA), cytokinin (CK), MeJA/CK- treated conditions

Project description:Purpose: Understanding of MeJA, CK effect on regulation of gene expression patterns in Arabidopsis roots

2016-07-30 | GSE80188 | GEO

Sugarcane transcriptome - MeJa treatment

Project description:Sugarcane one-eyed seed sets (genotype SP80-3280, CTC, Brazil) were planted in 200 ml plastic cups containing a commercial planting mix (Plantmax, Eucatex) and cultivated for 20 days under greenhouse conditions. The plantlets were subsequently transferred to a growth chamber at 26°C on a 16 h/8 h light/dark cycle with a photon flux density of 70 µE.m-2.s-1 to acclimate. Plantlets were then sprayed with a 100 µmol.L-1 MeJA solution (Bedoukian Research Inc., Danbury, CT), whereas control plantlets were treated with distilled water. Leaves were collected 0, 1, 6and 12 h after exposure to MeJA and immediately frozen in liquid nitrogen. Six plantlets were used for each time point. Extraction of total RNA was performed separately on each sample pool. Keywords: time course of hormone treatment

2007-05-20 | GSE4969 | GEO

Analysis of gene expression patterns of Arabidopsis roots grown in methyl jasmonate (MeJA), cytokinin (CK), MeJA/CK- treated conditions

Project description:Purpose: Understanding of MeJA, CK effect on regulation of gene expression patterns in Arabidopsis roots Total mRNA was extracted from 7-day-old Arabidopsis roots grown in MeJA (10uM), CK (50nM) and MeJA/CK-treated conditions. To generate cDNA libraries with TruSeq RNA library kit, 1 Î¼g of total RNA was used. This step consisted of polyA-selected RNA extraction, RNA fragmentation, random hexamer primed reverse transcription and 100 nt paired-end sequencing by Illumina HiSeq2000. 4,403 genes satisfying |fold change|â¥2 in at least one data set were collected.

2016-07-30 | E-GEOD-80188 | biostudies-arrayexpress

Shoot and root of barley seeds: Methyl Jasmonate (MeJA) treatment

Project description:Transcriptional profiling of barley shoot and root with MeJA

2014-04-01 | GSE41515 | GEO