Spatially-structured inflammatory response in the presence of a uniform stimulus: RNAseq screen
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ABSTRACT: Inflammatory responses occur within the complex spatial context of tissues and organs, and many questions remain about how tissue structure and cellular communication shape their spatiotemporal dynamics. Here, we used single-cell RNA sequencing to screen for genes differentially expressed under LPS (lipopolysaccharide) and vehicle control conditions in epithelial cells in zebrafish larvae. We used this data to choose candidate genes for spatial gene expression analysis.
ORGANISM(S): Danio rerio
PROVIDER: GSE285534 | GEO | 2025/02/07
REPOSITORIES: GEO
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