Transcriptomics

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Development of gene expression signatures on immunity for bursal peptide BPP-II


ABSTRACT: To further elucidate the mechanism of BPP-II on immunity on the broad molecular level, we have employed whole genome microarray expression profiling as a discovery platform to examine gene expression patterns during BPP-II treatment in a mouse derived hybridoma culture system. Hybridoma cell was treated ex vivo, and robust normalization of the data identified 2478 differentially expressed probe sets exhibiting minimum 1.5-fold changes that distinguished between BPP-II and control samples. Various pathwayswere significantly impacted by BPP-II treatment, and gene Ontology annotations show changes in the expression of molecules involved in immune and immunocyte related cellular processes. Expression of 8 genes (MS4A2,CD86,CD80, Fas,CDKN2A,CBLC, FGF21 and Fyn) from this signature was quantified in the RNA samples by QRT-PCR, confirming low variability between the predicted response patterns.

ORGANISM(S): Mus musculus

PROVIDER: GSE28696 | GEO | 2011/04/19

SECONDARY ACCESSION(S): PRJNA138907

REPOSITORIES: GEO

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