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Compare gene expression patterns in Chsy-1 wt and ko mouse 13.5 days embryo forelimbs

ABSTRACT: Transcriptional profiling of 13.5 day mouse embryo forelimbs. Gene expression comparison done between wild type and Chsy-1 gene knockout mice.

ORGANISM(S): Mus musculus

PROVIDER: GSE29694 | GEO | 2014/06/01

SECONDARY ACCESSION(S): PRJNA141115

REPOSITORIES: GEO

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Compare gene expression patterns in Chsy-1 wt and ko mouse 13.5 days embryo forelimbs

Project description:Transcriptional profiling of 13.5 day mouse embryo forelimbs. Gene expression comparison done between wild type and Chsy-1 gene knockout mice. Two-condition experiment, control (wild type) vs. test (Chsy-1 knockout). Biological replicates: 9 control replicates, 13 test replicates.

2014-06-01 | E-GEOD-29694 | biostudies-arrayexpress

Populus trichocarpa strain:HR.II.13.5 | cultivar:HR.II.13.5

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RNA sequencing of cultured mouse wild-type E10.25 forelimbs in control or cyclopmaine containing media [SOLiD]

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RNA sequencing of mouse littermate wild-type and Shh null E10.5 forelimbs [Illumina]

Project description:We wanted to identify differentially expressed genes in wild-type and Shh null E10.5 mouse forelimbs

2015-07-01 | GSE58645 | GEO

RNA sequencing of cultured mouse wild-type E10.25 forelimbs in control or cyclopmaine containing media [SOLiD]

Project description:We wanted to identify differentially expressed genes in wild-type forelimbs and forelimbs briefly exposed to Shh signaling. E10.25 forelimbs were cultured in control media and media containing cyclopmaine (inhibits the Hedgehog pathway) Generated two wild-type (control) and two cyclopmaine biological replicates for RNA-seq UT-Genome and Analysis Facility

2015-07-01 | E-GEOD-58664 | biostudies-arrayexpress

Gene Expression profiles of Bapx1 sorted cells from forelimbs (FL) of wildtype (WT) and Bapx1 null (HOMO) E12.5 mouse embryos

Project description:This study aims to look at gene expresion profiles between wildtype and Bapx1 knockout cells of the forelimbs in a E12.5 mouse embryo. Instead of looking at the whole forelimbs, only cells expressing Bapx1 were sorted by Fluroscent Activated Cell Sorting (FACS) and subjected to expression profiling by microarray.

2015-03-19 | GSE35649 | GEO

Single-cells transcriptomes of mouse developing forelimbs

Project description:Single-cells transcriptomes of mouse developing forelimbs

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Single-cells transcriptomes of mouse developing forelimbs

Project description:In order to try and evaluate Hoxd transcript heterogeneity during limb development, we produced single-limb cell transcriptomes of different origins, to see whether the apparently homogenous behavior in Hox gene transcriptional program as observed upon large-scale analyses was confirmed at the cellular level. We report here thatHoxd genes transcripts are present in various combinations in different limb cells and discuss the importance of these results in our understanding of how Hoxd genes are regulated and how their global functions are achieved in these structures. Single-cells transcriptomes from Hoxd11::GFP forelimbs with micro-dissection of autopod and zeugopod at embryonic day 12 (E12.5).

2018-08-24 | GSE114748 | GEO

Embryonic and adolescent forelimbs, brains, whole embryos, Aha-enrichment forelimbs, Mus musculus (wild-type, C57BlJ6/J; OIM, B6C3Fe a/a-Col1a2oim/J), proteomic dataset

Project description:Embryonic day (E)12.5 whole murine embryos, E11.5 - E14.5 whole murine embryos, E11.5 - E14.5, post-natal day (P)3 and P35 murine forelimbs, E14.5 brains, and COL1A2-mutant and COL1A2-WT forelimbs were fractionated and specific fractions were analyzed via LC-MS/MS. Aha-enrichment experiments consisted of in vivo protein labeling with azidohomoalanine (Aha) followed by tissue fractionation of the forelimbs and enrichment of labeled ECM proteins from the final IN pellet ('enriched'). 'Unenriched samples', or the background from which newly synthesized proteins were enriched from, were also analyzed via LC-MS/MS.

2020-06-05 | MSV000085556 | MassIVE

RNA sequencing of mouse littermate wild-type and Shh null E10.5 forelimbs [Illumina]

Project description:We wanted to identify differentially expressed genes in wild-type and Shh null E10.5 mouse forelimbs Used two wild-type technical replicates and two Shh null technical replicates UT-Genome and Analysis Facility

2015-07-01 | E-GEOD-58645 | biostudies-arrayexpress

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