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Expression analysis of INA6 cells after IL-6 withdrawal using TAS

ABSTRACT: Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. IL-6 has been withdrawn for 13 hours which initiates apoptosis. Expression data were processed with TAS.

ORGANISM(S): Homo sapiens

PROVIDER: GSE29837 | GEO | 2016/01/31

SECONDARY ACCESSION(S): PRJNA155233

REPOSITORIES: GEO

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Expression analysis of INA6 cells after IL-6 withdrawal

Project description:Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. IL-6 has been withdrawn for 13 hours which initiates apoptosis. Transcriptome-wide expression data was assessed by using TileShuffle (Otto C, Reiche K, Hackermüller J. "Detection of differentially expressed segments in tiling array data". Bioinformatics. 2012 Jun 1;28(11):1471-9. Epub 2012 Apr 6.).

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Expression analysis of INA6 cells after IL-6 withdrawal

Project description:Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. IL-6 has been withdrawn for 13 hours which initiates apoptosis. Transcriptome-wide expression data was assessed by using TileShuffle (Otto C, Reiche K, HackermÃ¼ller J. "Detection of differentially expressed segments in tiling array data". Bioinformatics. 2012 Jun 1;28(11):1471-9. Epub 2012 Apr 6.). We analyzed one Affymetrix Human Tiling 1.0R set

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2016-01-31 | GSE30006 | GEO

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Project description:Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. Cells were restimulated with IL-6 for 1 hour after IL-6 has been withdrawn for 13 hours. Expression data were processed with MAT (Johnson et al., "Model-based analysis of tiling-arrays for ChIP-chip." Proc Natl Acad Sci USA, 103:12457-62, 2006.).

2016-01-31 | GSE29824 | GEO

Expression analysis of INA6 cells after IL-6 restimulation

Project description:Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. Cells were restimulated with IL-6 for 1 hour after IL-6 has been withdrawn for 13 hours. Transcriptome-wide expression data was assessed by using TileShuffle (Otto C, Reiche K, Hackermüller J. "Detection of differentially expressed segments in tiling array data". Bioinformatics. 2012 Jun 1;28(11):1471-9. Epub 2012 Apr 6.).

2014-02-04 | GSE44656 | GEO

Expression analysis of INA6 cells after IL-6 restimulation

Project description:Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. Cells were restimulated with IL-6 for 1 hour after IL-6 has been withdrawn for 13 hours. Transcriptome-wide expression data was assessed by using TileShuffle (Otto C, Reiche K, HackermÃ¼ller J. "Detection of differentially expressed segments in tiling array data". Bioinformatics. 2012 Jun 1;28(11):1471-9. Epub 2012 Apr 6.). We analyzed one Affymetrix Human Tiling 1.0R set

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Expression analysis of INA6 cells permanently cultured in presence of IL-6

Project description:Whole transcriptome expression analysis of INA6 cells on Affymetrix Human Tiling 1.0 array set. Cells have been permanently cultured in presence of IL-6. Transcriptome-wide expression data was assessed by using TileShuffle (Otto C, Reiche K, Hackermüller J. "Detection of differentially expressed segments in tiling array data". Bioinformatics. 2012 Jun 1;28(11):1471-9. Epub 2012 Apr 6.).

2014-02-04 | GSE44658 | GEO

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