Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacillus subtilis 168 moenomycin stimulon

ABSTRACT: Transcriptional response of Bacillus subtilis to moenomycin in wild-type 168.

ORGANISM(S): Bacillus subtilis

PROVIDER: GSE30001 | GEO | 2011/06/17

SECONDARY ACCESSION(S): PRJNA155351

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Bacillus subtilis 168 moenomycin stimulon

Project description:Transcriptional response of Bacillus subtilis to moenomycin in wild-type 168. Bacillus subtilis 168, WT (-MOE) vs. WT (+MOE). The experiment was conducted in triplicate using three independent total RNA preparations. Untreated samples were labeled with Alexa Fluor 555 and moenomycin treated samples were labeled with Alexa Fluor 647.

2011-06-17 | E-GEOD-30001 | biostudies-arrayexpress

Bacillus subtilis CU1065 ramoplanin stimulon

Project description:Transcriptional response of Bacillus subtilis to ramoplanin in wild-type CU1065.

2011-06-17 | GSE30002 | GEO

Bacillus subtilis 168 cells: ccpN mutant and ccpN-yqfL double mutant analysis

Project description:This SuperSeries is composed of the following subset Series: GSE11873: Bacillus subtilis 168 cells: wild-type vs. ccpN (non polar) GSE11876: Bacillus subtilis 168 cells: wild-type vs. (ccpN-yqfL) double mutant Refer to individual Series

2008-07-01 | E-GEOD-11937 | biostudies-arrayexpress

Expression analysis of sporulating Bacillus subtilis strain 168 deleted for prpE gene

Project description:Investigation of whole genome gene expression level changes in sporulating Bacillus subtilis 168 delta-prpE mutant, compared to the wild-type strain. The mutation engineered into this strain results in impaired germination of spores. A six chip study using total RNA extracted from three separate wild-type cultures of sporulating Bacillus subtilis 168 and three separate cultures of sporulating mutant strain, Bacillus subtilis 168 delta-prpE, in which prpE (yjbP BSU11630) gene coding for a protein phosphatase is deleted entirely. Each chip consists of four fields able to measure the expression level of 4,104 genes from Bacillus subtilis subsp. subtilis strain 168 NC_000964 with eight 60-mer probe pairs (PM/MM) per gene, with two-fold technical redundancy.

2013-07-08 | E-GEOD-44125 | biostudies-arrayexpress

Expression data from Bacillus subtilis 168 during growth

Project description:The gene expression of Bacillus subtilis 168 showed 3 major patterns including early expression, transition expression and late expression We monitored Bacillus subtilis gene expression by using microarray at differernt time points

2013-04-10 | GSE45933 | GEO

Expression analysis of sporulating Bacillus subtilis strain 168 deleted for prpE gene

2013-07-08 | GSE44125 | GEO

Expression data from Bacillus subtilis 168 during growth

2013-04-10 | E-GEOD-45933 | biostudies-arrayexpress

Bacillus subtilis CU1065 ramoplanin stimulon

Project description:Transcriptional response of Bacillus subtilis to ramoplanin in wild-type CU1065. Bacillus subtilis CU1065, WT (-RAM) vs. (+RAM) and liaR (yvqC) deletion (-RAM) vs. (+RAM). The experiment was conducted in triplicate using three independent total RNA preparations. Combined reference RNA was labeled with Cy3 and ramoplanin treated/untreated samples were labeled with Cy5.

2011-06-17 | E-GEOD-30002 | biostudies-arrayexpress

Bacillus subtilis WalR (YycF) ChIP-chip Bacillus subtilis; Bacillus subtilis subsp. subtilis str. 168

Project description:Identification of the specific WalR (YycF) binding regions on the B. subtilis chromosome during exponential and phosphate starvation growth phases. The data serves to extend the WalRK regulon in Bacillus subtilis and its role in cell wall metabolism, as well as implying a role in several other cellular processes. For each sample analyzed in this study three biological replicates were performed. Three different samples were taken from a strain expressing the WalR-SPA protein as well as from wild-type (168) without a tagged WalR. Samples were taken from exponentially growing cells in low phosphate medium (LPDM) as well as from phosphate-limited cells (T2). Each sample compares ChIP DNA vs. Total DNA from the same cells.

2015-01-26 | E-GEOD-65272 | biostudies-arrayexpress

Bacillus subtilis KS002 Targocil stimulon

Project description:Transcriptional response of Bacillus subtilis KS002 to targocil

2014-02-01 | GSE54577 | GEO