Genomics

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Enhancer-Mediated Regulation of HIF-2α by the SOCS3–JAK1–STAT3 Axis in Renal Cancer


ABSTRACT: Clear cell renal cell carcinoma (ccRCC) is characterized by frequent loss of the von Hippel–Lindau (VHL) tumor suppressor, leading to pathological accumulation of hypoxia-inducible factor 2α (HIF-2α). Although direct HIF-2α inhibitors such as Belzutifan have shown clinical efficacy, therapeutic resistance remains a major challenge. To uncover additional regulatory mechanisms governing HIF-2α activity, we performed a genome-wide CRISPR screen in VHL-deficient ccRCC cells. This revealed the TREX mRNA export complex as a positive regulator and Suppressor of Cytokine Signaling 3 (SOCS3) as the most significant negative regulator of HIF-2α. We demonstrate that SOCS3 suppresses HIF-2α expression through inhibition of the JAK1–STAT3 signaling axis. Loss of SOCS3 activates STAT3, which directly binds to enhancers upstream of the EPAS1 (HIF-2α) gene, promoting its transcription. SOCS3 overexpression or JAK1/STAT3 inhibition suppresses HIF-2α levels, impairs tumor growth, and reduces metastasis in ccRCC models. These findings define a novel SOCS3–JAK1–STAT3–HIF-2α regulatory axis and identify enhancer-mediated transcriptional control as a critical mechanism of HIF-2α regulation. Targeting this pathway offers a promising strategy to overcome resistance to current HIF-2α inhibitors and improve therapeutic outcomes in ccRCC.

ORGANISM(S): Homo sapiens

PROVIDER: GSE303721 | GEO | 2026/02/06

REPOSITORIES: GEO

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