Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

E.coli response to Antimicrobial Arylamides

ABSTRACT: We treated logarithmically growing cultures of E.coli with a sub-lethal dose of an antimicrobial arylamide compound (PMX 10070) and Polymyxin B sulfate to measure transcriptional responses in an effort to understand mechanism of action Treated samples were assayed at time = 20min and time = 60min after arylamide and polymyxin B exposure

ORGANISM(S): Escherichia coli

PROVIDER: GSE31140 | GEO | 2011/08/03

SECONDARY ACCESSION(S): PRJNA144927

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

E.coli response to Antimicrobial Arylamides

Project description:We treated logarithmically growing cultures of E.coli with a sub-lethal dose of an antimicrobial arylamide compound (PMX 10070) and Polymyxin B sulfate to measure transcriptional responses in an effort to understand mechanism of action Treated samples were assayed at time = 20min and time = 60min after arylamide and polymyxin B exposure E.coli were isolated and RNA extracted at different time points after exposure to arylamide, polymyxin B or control

2011-08-02 | E-GEOD-31140 | biostudies-arrayexpress

Coupled evolution of transcription and mRNA degradation.

Project description:We measured mRNA levels of two yeast species (S.cerevisiae and S.paradoxus) and their hybrid, at four time-points (0, 20min, 40min, 60min) following transcription arrest using 1,10-Phenantroline (150ug/ml). This data was used to infer mRNA degradation rates of orthologous genes, study the divergence of mRNA degradation rates and the contribution of cis and trans mutations.

2011-08-01 | GSE28849 | GEO

Wild type E.coli SE15 vs. LuxS mutant E.coli SE15

Project description:Transcriptional profiling of E.coli SE15 comparing wild type E.coli SE15 with Autoindecur 2 synthesis gene LuxS mutnat E.coli SE15. E.coli SE15 is isolated from indwelling catheter of urinary tract infected patient. Examine change of quorum sensing related gene by deleting autoinducer 2 synthesis gene LuxS in E.coli

2013-08-02 | GSE49474 | GEO

Caco-2 cells cocultured with E.coli Nissle 1917

Project description:Confluent Caco-2 cells cultured over 6 hours non-treated with E.coli Nissle 1917 (GSM40938 and GSM40941). Confluent Caco-2 cells cocultured over 6 hours with E.coli Nissle 1917 (GSM40881 and GSM40937). Keywords: parallel sample

2005-03-02 | GSE2232 | GEO

E.coli

Project description:E.coli

| PRJEB11782 | ENA

Quantitative Different Analysis of antimicrobial peptide LL37 expressed in E.coli Top 10 under aerobic and anaerobic condition.

Project description:We reported the transcriptional profiles of E.coli expressing antimicrobial peptide LL37 under stress response condition.

2013-08-21 | GSE43408 | GEO

Quantitative Different Analysis of antimicrobial peptide LL37 expressed in E.coli Top 10 under aerobic and anaerobic condition.

Project description:We reported the transcriptional profiles of E.coli expressing antimicrobial peptide LL37 under stress response condition. 4 samples, two groups, one group is under aerobic condition, the other group is under anaerobic condition. One of samples is E.coli which expressed LL37 as induction in each group, another sample is E.coli with no LL37 expression in vivo as control in each group.

2013-08-21 | E-GEOD-43408 | biostudies-arrayexpress

Wild type E.coli SE15 vs. LuxS mutant E.coli SE15

2013-08-02 | E-GEOD-49474 | biostudies-arrayexpress

Avian E.coli

Project description:Avian E.coli

| PRJEB11955 | ENA

Asta E.coli

Project description:Asta E.coli

| PRJEB18619 | ENA