Transcriptomics

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Clonal expansion of cytotoxic CD8+ T cells in lecanemab-associated ARIA


ABSTRACT: Amyloid-related imaging abnormalities (ARIA) remain the principal safety concern limiting adoption of anti-amyloid therapies such as lecanemab, yet their underlying biology is poorly defined. To address this, we performed deep multi-omic profiling of peripheral blood mononuclear cells from three Alzheimer's disease (AD) patients who developed ARIA and three matched controls. Single-cell RNA sequencing, CITE-seq, V(D)J clonotyping, and metabolomic/lipidomic profiling revealed a coordinated reprogramming of the CD8+ compartment in ARIA+ patients. CD8+ TEM and TEMRA subsets were numerically expanded, transcriptionally enriched for cytotoxic and migratory programs, and exhibited increased clonal expansion. Transcription factor inference and metabolomics converged on a glycolytic bias, supporting short-lived effector activity. Ligand-receptor modeling identified ARIA-associated signaling from CD14+ and CD16+ monocytes that augmented antigen presentation, adhesion, and chemokine axes directed toward effector CD8s. Finally, integration with an external cerebrovascular atlas confirmed that ARIA-associated TEM/TEMRAs are transcriptionally "addressed" for vascular engagement.

ORGANISM(S): Homo sapiens

PROVIDER: GSE316096 | GEO | 2026/01/20

REPOSITORIES: GEO

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