Transcriptomics

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A Chemical-Genetic Interaction Matrix Reveals Drug Mechanism and Genetic Architecture


ABSTRACT: This dataset contains the RNA-seq data associated with a CRISPR/Cas9 study for which the screen results (sgRNA reads) are included in the GEO record GSE15547. Specifically, this dataset contains the RNA-seq results used to assess absolute gene expression in Nalm-6 cells, results for 3 PPP3CA knockout polulations, 3 PPP3R1 knockout populations, one FK-506 (tacrolimus) treated population and ERCC spike-in experiments on PABIR1 (formerly FAM122A) knockout cells, each with their own wild type and/or DMSO-treated control samples.

ORGANISM(S): Homo sapiens

PROVIDER: GSE316956 | GEO | 2026/03/13

REPOSITORIES: GEO

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