Transcriptomics

Dataset Information

0

Intracellular pH dynamics promotes zebrafish larval tail regeneration


ABSTRACT: Intracellular pH (pHi) dynamics regulates numerous cell behaviors, including migration and proliferation. While these functions are well-established in cell lines, the role of pHi changes in vivo is less well understood. We generated a transgenic zebrafish line expressing a fluorescent ratiometric pHi biosensor and identified functional changes in pHi during zebrafish larval tail regeneration. We found that tail amputation led to a transient decrease in pHi, followed by a prolonged increase in pHi above pre-amputation values. Moreover, we showed that pharmacologically inhibiting Na+/H+ exchanger (NHE) activity or decreasing extracellular pH attenuated the post-amputation increase in pHi, reduced subsequent cell proliferation, and impaired tail regeneration. We further found that inhibiting NHE activity post-amputation led to elevated inflammation, disrupted myeloid cell behavior, decreased reactive oxygen species, and increased glycogen synthase kinase-3 (GSK3) activity. Finally, we showed that the regeneration defects in larvae with disrupted pHi were partially rescued by the GSK3 inhibitor BIO. Our data reveal a previously unrecognized role for pHi dynamics in coordinating tissue behaviors in vivo and enabling zebrafish larval tail regeneration.

ORGANISM(S): Danio rerio

PROVIDER: GSE318689 | GEO | 2026/05/14

REPOSITORIES: GEO

Dataset's files

Source:
Action DRS
Other
Items per page:
1 - 1 of 1

Similar Datasets

2021-09-07 | GSE145497 | GEO
2017-03-10 | GSE72422 | GEO
2008-04-07 | E-GEOD-10188 | biostudies-arrayexpress
2010-05-19 | E-GEOD-11391 | biostudies-arrayexpress
2014-05-01 | E-GEOD-56178 | biostudies-arrayexpress
2019-01-31 | GSE118515 | GEO
2019-08-26 | PXD010092 | Pride
2019-04-23 | E-MTAB-7716 | biostudies-arrayexpress
| PRJNA1259437 | ENA
2019-08-22 | PXD011627 | Pride