Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gene expression comparison between undifferentiated H9 cells and trophoblasts

ABSTRACT: Undifferentiated H9 express high levels of c-Myc. Upon differentiation, Myc levels decrease. Gene expression analysis was carried out between these 2 cell types

ORGANISM(S): Homo sapiens

PROVIDER: GSE31965 | GEO | 2011/09/19

SECONDARY ACCESSION(S): PRJNA155273

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Gene expression comparison between undifferentiated H9 cells and trophoblasts

Project description:Undifferentiated H9 express high levels of c-Myc. Upon differentiation, Myc levels decrease. Gene expression analysis was carried out between these 2 cell types H9 cells were treated with BMP-4 for 6 days in order to differentiate them toward a trophoblast lineage.

2011-09-18 | E-GEOD-31965 | biostudies-arrayexpress

4sUDRB-seq of human PA1 cells, undifferentiated H9 cells and H9 differentiated FB neurons

Project description:We have optimized the metabolic tagging of newly transcribed RNAs by 4-thiouridine (4sU) to identify newly-transcribed (nascent) circRNAs from human PA1 cells, undifferentiated H9 cells and H9 differentiated FB neurons.

2016-04-08 | GSE73325 | GEO

Cyclin D1 ChIP-seq in H9 undifferentiated human pluripotent stem cells

Project description:Cyclin D1 ChIP-seq in H9 undifferentiated human pluripotent stem cells

| PRJEB10203 | ENA

Gene expression analysis of H9 hESC derived cardiomyocytes (CM) and neuron stem cells (NSC)

Project description:In this study, we generated wildtype H9 hESC derived cardiomyocytes (CM) and neural stem cells (NSC) by in vitro differentiation. Global gene expression profiles were compared among undifferentiated H9 hESC and the derived CM and NSC. Comparison of global gene expression profiles of undifferentiated H9 hESC and the derived CM and NSC populations.

2013-08-31 | E-GEOD-48257 | biostudies-arrayexpress

poly(A+)-seq profiling of gene expression in control H9 and (CFIm25 KD+ 3Flag-CFIm25 overexpression) H9 cell lines

Project description:We carried out CFIm25 KD experiments in H9 cell line (hESCs). After poly(A+)-seq, we found the expression of hundreds of genes were changed. To investigate if the effect is a direct or indirect effect of CFIm25 KD, we next carried out 3Flag-CFIm25 overexpression in CFIm25 KD cells for gene-rescue experiments. After we obtained this cell line, here we performed poly(A+)-seq in control H9 and (CFIm25 KD+ 3Flag-CFIm25 overexpression)H9 cell lines. The goal of this experiment is to investigate if CFIm25 overexpression could rescue the gene expression phenotype caused by CFIm25 KD.

2022-04-21 | GSE176328 | GEO

Gene expression analysis of H9 hESC derived cardiomyocytes (CM) and neuron stem cells (NSC)

2013-08-31 | GSE48257 | GEO

4sUDRB-seq of human PA1 cells, undifferentiated H9 cells and H9 differentiated FB neurons.

| OEX000090 | NODE

Roseobacter sp. H9 strain:H9

Project description:Roseobacter sp. H9 strain:H9 Genome sequencing and assembly

| PRJNA657503 | ENA

Pseudomonas sp. H9 strain:H9

Project description:Pseudomonas sp. H9 strain:H9 Genome sequencing and assembly

| PRJNA526342 | ENA

Cyclin D1 ChIP-seq in H9 undifferentiated human pluripotent stem cells

Project description:H9 human pluripotent stem cells were grown in chemically defined media with Activin A and FGF2. Four 10cm plates with 70% confluency were used per sample. Cells were cross-linked by adding a final concentration of 1% PFA into culture media and incubated for 10 min at RT for Cyclin D1 ChIP. ChIP-seq experiment was performed in duplicate.

2016-02-01 | E-MTAB-3807 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data