Transcriptomics

Dataset Information

44

Comparison of intestinal surface CD3- refractory celiac disease type II (RCDII) cell lines with intestinal surface CD3+ cell lines of non-RCDII patients


ABSTRACT: Analysis of transcriptional differences between aberrant (surface CD3-) RCDII cell lines and regular (surface CD3+) intraepithelial cell lines in order to characterize aberrant RCDII cells. All cell lines were cultured from duodenal biopsies of RCDII or non-RCDII (either celiac or non-celiac) patients. Overall design: We compared 3 RCDII cell lines from RCDII patients P1-P3 with the following control cell lines: CD3+CD4+ T cell line from P1 and P3, CD3+CD8+ T cell line from P3 and mixed CD4/CD8+ T cell lines from non-RCDII patients. All control cells matched the phenotype of mature T cells (CD3+CD4+ and/or CD3+CD8+). Samples were randomly distributed among two BeadChips and measured in duplicates.

INSTRUMENT(S): Illumina HumanHT-12 V3.0 expression beadchip

ORGANISM(S): Homo sapiens  

SUBMITTER: Frederike Schmitz  

PROVIDER: GSE33078 | GEO | 2012-06-12

SECONDARY ACCESSION(S): PRJNA149525

REPOSITORIES: GEO

Similar Datasets

2012-06-11 | E-GEOD-33078 | ArrayExpress
| GSE12079 | GEO
| GSE73599 | GEO
2015-01-19 | E-MTAB-2437 | ArrayExpress
2009-05-29 | E-GEOD-12465 | ArrayExpress
2009-05-20 | GSE12465 | GEO
2009-05-29 | E-GEOD-12466 | ArrayExpress
2009-05-20 | GSE12464 | GEO
| GSE105784 | GEO
2009-05-29 | E-GEOD-12464 | ArrayExpress