Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pseudomonas putida KT2440 gene expression comparison of ethanol growth with lanthanum chloride or oxide.

ABSTRACT: The physiological impact of lanthanum solubility on Pseudomonas putida KT2440 was assessed using RNA-seq transcriptomics. Differential gene expression analysis was applied to samples of P. putida KT2440 grown in minimal media with ethanol where lanthanum was added in the highly soluble chloride or poorly soluble oxide form.

ORGANISM(S): Pseudomonas putida KT2440

PROVIDER: GSE334228 | GEO | 2026/07/01

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Methylobacterium nodulans ORS 2060 gene expression comparison of phosphate-limited methanol growth with lanthanum chloride or oxide.

Project description:The physiological impact of lanthanum solubility on Methylobacterium nodulans ORS 2060 was assessed using RNA-seq transcriptomics. Differential gene expression analysis was applied to samples of M. nodulans ORS2060 grown in phosphate-limited minimal media with methanol where lanthanum was added in the highly soluble chloride or poorly soluble oxide form.

2026-07-01 | GSE334277 | GEO

Pseudomonas putida KT2440: Control vs. indole 1mM treated

Project description:Transcriptional profiling of P. putida KT2440 cells comparing control untreated cells with 1 mM indole treated cells

2012-10-02 | GSE41254 | GEO

Expression data from Pseudomonas putida KT2440 Tn5 mutants

Project description:We used Progenika oligonucleotide arrays to monitor the gene expression after cold shock from 30°C to 10°C. The 10°C samples of the P. putida wild type were compared to those of the respective P. putida KT2440 Tn5 mutants affected in either cbrA (PP4695), cbrB (PP4696), pcnB (PP4697), vacB (PP4880) or bipA (PP5044).

2014-02-01 | GSE28257 | GEO

Generation of Ionic Liquid Tolerant Pseudomonas putida KT2440 Strains via Adaptive Laboratory Evolution

Project description:Transcriptome of the wildtype or evolved Pseudomonas putida KT2440

2020-07-08 | GSE149827 | GEO

Understanding Isoprenol effect on Pseudomonas putida KT2440 grown on a minimal medium supplemented with glucose

Project description:Pseudomonas putida KT2440 (KT2440) has been established as an industrially relevant chassis for the production of the jet-fuel precursor isoprenol. However, the wild type KT2440 strain consumed isoprenol as sole carbon source and its growth is inhibited by isoprenol, which is an impediment to high titer, rate, yield production. In this study, we investigated genes responsible for isoprenol catabolism and the stress responses of Pseudomonas putida via RNA-seq.

2026-04-20 | GSE281392 | GEO

Transcriptome of Pseudomonas putida KT2440 in response to selenite

Project description:The bacterium Pseudomonas putida KT2440 has the ability to reduce selenite forming nanoparticles of elemental selenium. This is the transcriptome of the organism when cultured in the presence of selenite.

2022-10-01 | GSE214391 | GEO

Pseudomonas putida KT2440 : Control vs. paraquat (PQ) or cumen hydroperoxide (CHP) treated

Project description:Transcriptional profiling of P. putida KT2440 cells comparing control untreated cells with PQ or CHP treated cells

2011-12-15 | GSE34409 | GEO

Evaluation of Pseudomonas putida KT2440 gene expression in the Arabidopsis thaliana rhizosphere

Project description:Gene expression patterns of the plant colonizing bacterium,Pseudomonas putida KT2440 were evaluated as a function of growth in the Arabidopsis thaliana rhizosphere. Gene expression in rhizosphere grown P. putida cells was compared to gene expression in non-rhizosphere grown cells. Keywords: Gene expression

2008-01-11 | GSE9005 | GEO

Gene expression of P. putida KT2440 cultivated in an anoxic bioelectrochemical system

Project description:To get insights in the electrogenic anaerobic lifestyle of P. putida KT2440 cultivated in a bioelectrochemical system (BES), we employed whole genome microarray expression profile.

2024-09-18 | GSE266590 | GEO

RNA-seq data for P. putida KT2440 under diverse conditions for regulatory network analysis

Project description:This dataset consists of RNA-seq data for P. putida KT2440 to enable comparison of transcriptional regulatory networks across Pseudomonas strains.

2026-03-10 | GSE322955 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data