Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Microarray analysis of male strobili in fertile and sterile male strobili of Cryptomeria japonica

ABSTRACT: Investigation of comprehensive gene expression level changes in male strobili of sterile mutant, compared to the fertile plant. We designed a new custum array derived from ESTs of Cryptomeria japonica for this study. Male strobili of C. japonica were collected from Toyama 1 half-sib F2 pedigree. Toyama 1 male-sterile mutant was first reported in Saito, M. , H. Taira, and Y. Furuta (Journal of Forest Research 3(3):167-173).

ORGANISM(S): Cryptomeria japonica

PROVIDER: GSE33499 | GEO | 2013/07/30

SECONDARY ACCESSION(S): PRJNA148847

REPOSITORIES: GEO

ACCESS DATA

Json Xml

Similar Datasets

Microarray analysis of male strobili in fertile and sterile male strobili of Cryptomeria japonica

Project description:Investigation of comprehensive gene expression level changes in male strobili of sterile mutant, compared to the fertile plant. We designed a new custum array derived from ESTs of Cryptomeria japonica for this study. Male strobili of C. japonica were collected from Toyama 1 half-sib F2 pedigree. Toyama 1 male-sterile mutant was first reported in Saito, M. , H. Taira, and Y. Furuta (Journal of Forest Research 3(3):167-173). Microarray studies using both individual samples and pooled samples were performed. Total RNA was extracted from male strobili at four developmental stages derived from each seven fertile and male-sterile trees as individual samples. Pooled RNA samples were prepared from four to eight different fertile and sterile plants at three developmental stages.

2013-07-30 | E-GEOD-33499 | biostudies-arrayexpress

Transcriptome analysis of male strobilus induction by gibberellic acid treatment in Cryptomeria japonica

Project description:Investigation of gene expression dynamics associated with male strobilus induction in Cryptomeria japonica in response to gibberellic acid (GA) treatment. [SUBMITTER_CITATION]: Transcriptome Analysis in Male Strobilus Induction by Gibberellin Treatment in Cryptomeria japonica D. Don Manabu Kurita 1,?, Kentaro Mishima 2,*,? , Miyoko Tsubomura 2, Yuya Takashima 2 , Mine Nose 2, Tomonori Hirao 2 and Makoto Takahashi 2 Forests 2020, 11(6), 633

2020-07-07 | GSE120227 | GEO

Cryptomeria japonica

Project description:Microarray analysis of male strobili in fertile and sterile male strobili of Cryptomeria japonica

| PRJNA148847 | ENA

Cryptomeria japonica

Project description:Small RNAs from male strobili of Cryptomeria japonica.

| PRJDB5804 | ENA

Cryptomeria japonica

Project description:Cryptomeria japonica consensus map

| PRJNA38457 | ENA

Affymetrix SNP array data for Cryptomeria japonica samples [Axiom_Cj70K_v2]

Project description:Japanese cedar (Cryptomeria japonica) is an allogamous coniferous species that relies on wind-mediated pollen and seed dispersal, and it is one of the most important forestry tree species in Japan. For accelerating breeding, we collected massive SNPs based on ESTs from several organs using NGS, and thus carried out QTL, GWAS and GS based on high-density linkage maps.

2018-05-07 | GSE95618 | GEO

Affymetrix SNP array data for Cryptomeria japonica samples [Axiom_Cj70K_v1]

2018-05-07 | GSE95616 | GEO

Cryptomeria japonica

Project description:Cryptomeria japonica BAC library sequencing

| PRJDB2935 | ENA

Cryptomeria japonica

Project description:Transcriptome analysis of Cryptomeria japonica

| PRJDB42 | ENA

Cryptomeria japonica

Project description:Cryptomeria japonica Raw sequence reads

| PRJNA698260 | ENA