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Gene expression in Longissimus lumborum and Semimembranosus skeletal muscles in pig using the GenmascqChip (custom 15K Agilent microarray)

ABSTRACT: Transcriptional profiling between two different skeletal muscles (Longissimus and Semimembranosus) in pig

ORGANISM(S): Sus scrofa

PROVIDER: GSE33957 | GEO | 2013/01/10

SECONDARY ACCESSION(S): PRJNA150553

REPOSITORIES: GEO

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Gene expression in Longissimus lumborum and Semimembranosus skeletal muscles in pig using the GenmascqChip (custom 15K Agilent microarray)

Project description:Transcriptional profiling between two different skeletal muscles (Longissimus and Semimembranosus) in pig The 90 pigs (females and barrows) used in gene expression analyses are part of a larger F2 population of 1,000 animals, setup within the framework of a QTL detection program. These animals were produced as a second generation intercross between two commercial sire lines (F016, Pietrain type line, and FH019, synthetic line from Hampshire, Duroc and Large-White founders, FRANCE-HYBRIDES, St Jean de Braye, France).

2013-01-10 | E-GEOD-33957 | biostudies-arrayexpress

Gene expression in Longissimus lumborum skeletal muscles in pig using the GenmascqChip (custom 15K Agilent microarray)

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Gene expression in Semimembranosus skeletal muscles in pig using the GenmascqChip (custom 15K Agilent microarray)

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Gene expression in Semimembranosus skeletal muscles in pig using the GenmascqChip (custom 15K Agilent microarray)

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Gene expression in Longissimus lumborum in pig using the GenmascqChip (custom 15K Agilent microarray)

Project description:Genetic variability of transcript abundance in pig skeletal muscle at slaughtering.

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Gene expression in Longissimus lumborum in pig using the GenmascqChip (custom 15K Agilent microarray)

Project description:Genetic variability of transcript abundance in pig skeletal muscle at slaughtering. The 325 pigs (females and barrows) used in gene expression analyses are part of a larger F2 population of 1,000 animals, setup within the framework of a QTL detection program. These animals were produced as a second generation intercross between two commercial sire lines (F016, Pietrain type line, and FH019, synthetic line from Hampshire, Duroc and Large-White founders, FRANCE-HYBRIDES, St Jean de Braye, France).

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Expression data from longissimus dorsi muscle of Shaziling pig at 25-days old and longissimus dorsi musle of Yorkshire pig at 25-days old

Project description:To characterize the mechanism of porcine skeletal muscle development, transcriptome analysis of longissimus dorsi muscle between Shaziling and Yorkshire pig breeds

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Comparison of transcriptomic landscapes of different lamb muscles using RNA-Seq

Project description:Transcriptome deep sequencing is a powerful tool for exploring the genetic architecture of complex traits. Gene expression patterns may explain a high degree of the observed phenotypic differences in histochemical and metabolic parameters related to meat quality among different muscles. Utilizing RNA Sequencing, this study characterized the whole transcriptome of nine lamb muscles: Semimembranosus (SM), Semitendinosus (ST), Gluteobiceps (GB), Gluteus medius (GM), Rectus femoris (RF), Supraspinatus (SS), Longissimus lumborum (LL), Adductor (AD) and Psoas major (PS).

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