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The transcriptional profiles of bluestem and Indian grass - Konza 2006 [Zea mays; Andropogon gerardii; Sorghastrum nutans]

ABSTRACT: We measured transcriptional profiles of individuals of Andropogon gerardii and Sorghastrum nutans, two C4 grass species native to North American grasslands, in a field experiment in which both temperature and precipitation have been manipulated to simulate key aspects of forecasted climate change.

ORGANISM(S): Zea mays Sorghastrum nutans Andropogon gerardi

PROVIDER: GSE35492 | GEO | 2012/05/12

SECONDARY ACCESSION(S): PRJNA152287

REPOSITORIES: GEO

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The transcriptional profiles of bluestem and Indian grass - Konza 2006 [Zea mays; Andropogon gerardii; Sorghastrum nutans]

Project description:We measured transcriptional profiles of individuals of Andropogon gerardii and Sorghastrum nutans, two C4 grass species native to North American grasslands, in a field experiment in which both temperature and precipitation have been manipulated to simulate key aspects of forecasted climate change. 99 samples were analyzed.

2012-05-11 | E-GEOD-35492 | biostudies-arrayexpress

Bluestem transcription profiles - Konza 2005

2009-06-10 | GSE16418 | GEO

Bluestem transcription profiles - Konza 2005

Project description:We measured transcriptional profiles of individuals of Andropogon gerardii, a C4 grass native to North American grasslands, in a field experiment in which both temperature and precipitation have been manipulated to simulate key aspects of forecasted climate change. By using microarrays developed for a closely related model species, Zea mays, we were able to compare the relative influence of warming versus altered soil moisture availability on expression levels of over 7,000 genes. The plants were located in 12 experimental plots under rainout shelters on the Konza Prairie Biological Station in Manhattan, Kansas.

2010-05-18 | E-GEOD-16418 | biostudies-arrayexpress

The transcriptional profiles of bluestem and Indian grass - Konza 2006 [Zea mays; Andropogon gerardii; Sorghastrum nutans]

Project description:The transcriptional profiles of bluestem and Indian grass - Konza 2006 [Zea mays; Andropogon gerardii; Sorghastrum nutans]

| PRJNA152287 | ENA

Grass shrimp SAGE libraries

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2006-05-18 | GSE4853 | GEO

Grass shrimp SAGE libraries

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Transcriptomic study of couch grass rhizomes exposed to dehydration

Project description:This study explored the transcriptomic response of couch grass rhizome meristhematic region exposed to mild, medium and severe drought. The couch grass stress response was compared with the response of two contrasting barley cultivars and the specificities and commonalities in transcriptomic stress response of both species were identified.

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High Temperature on Immune Response of Grass Carp

Project description:Effect of High Temperature on Immune Response of Grass Carp (Ctenopharyngodon idellus) by Transcriptome Analysis To understand the immune response mechanisms of this fish in high temperature circumstance, the transcriptomic profiles of the spleens from grass carp groups undergoing heat stress and normal temperature were investigated.

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Project description:Effect of High Temperature on Immune Response of Grass Carp (Ctenopharyngodon idellus) by Transcriptome Analysis

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Metabolism-based resistance to herbicides in black-grass

Project description:Resistance to herbicides in weeds can be due to alteration(s) in the gene encoding the herbicide target site, or to herbicide degradation via a deviation in plant general metabolism. If target-site-based resistance is easy to study, the multigenic control of metabolism-based resistance renders it much more complex to study. Metabolism-based resistance to herbicides represents the major part of herbicide resistance in black-grass. Its most likely basis is an overexpression of genes encoding enzymes degrading herbicides. We thus seek to identify such overexpressed genes by comparing the transcriptomes of resistant and sensitive black-grass individuals belonging to an F2 line segregating for two resistance genes. Given there are no genomic tools developed for black-grass, this approach will use heterologous hybridisation onto a wheat Affymetrix microarray. Comparison using heterologous hybridisation onto a wheat whole-genome microarray of transcriptome of three pools of black-grass plants obtained 2h30 after herbicide spraying at field rate. The three pools correspond to: · Sensitive plants (killed by herbicide). · Moderately resistant plants (growth impaired by herbicide but plants still alive) · Resistant plants (growth unimpaired by herbicide)

2010-05-04 | GSE15864 | GEO

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